U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    IHO1 interactor of HORMAD1 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707136, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    IHO1provided by VGNC
    Official Full Name
    interactor of HORMAD1 1provided by VGNC
    Primary source
    VGNC:VGNC:110359
    See related
    Ensembl:ENSMMUG00000053526
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CCDC36
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IHO1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (105278808..105342934)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (93114631..93180134, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene kelch domain containing 8B Neighboring gene cytochrome c oxidase subunit 6A1, mitochondrial pseudogene Neighboring gene chromosome 2 C3orf84 homolog Neighboring gene chromosome 2 C3orf62 homolog Neighboring gene ubiquitin specific peptidase 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homologous chromosome pairing at meiosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic DNA double-strand break formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed nuclear chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    interactor of HORMAD1 protein 1
    Names
    coiled-coil domain containing 36

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      105278808..105342934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130915.2 → XP_014986401.1  interactor of HORMAD1 protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 609
      DUF4700; Domain of unknown function (DUF4700)

    2. XM_002802780.3 → XP_002802826.1  interactor of HORMAD1 protein 1 isoform X4

      See identical proteins and their annotated locations for XP_002802826.1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Related
      ENSMMUP00000073828.1, ENSMMUT00000105411.1
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 596
      DUF4700; Domain of unknown function (DUF4700)

    3. XM_015130918.2 → XP_014986404.1  interactor of HORMAD1 protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 607
      DUF4700; Domain of unknown function (DUF4700)

    4. XM_015130919.1 → XP_014986405.1  interactor of HORMAD1 protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:15 → 604
      DUF4700; Domain of unknown function (DUF4700)

    5. XM_015130916.1 → XP_014986402.1  interactor of HORMAD1 protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 609
      DUF4700; Domain of unknown function (DUF4700)

    6. XM_015130917.2 → XP_014986403.1  interactor of HORMAD1 protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:19 → 609
      DUF4700; Domain of unknown function (DUF4700)

    7. XM_015130920.2 → XP_014986406.1  interactor of HORMAD1 protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A7A7
      Conserved Domains (1) summary
      pfam15771
      Location:15 → 604
      DUF4700; Domain of unknown function (DUF4700)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials