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    PSMD9 proteasome 26S subunit, non-ATPase 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701174, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PSMD9provided by VGNC
    Official Full Name
    proteasome 26S subunit, non-ATPase 9provided by VGNC
    Primary source
    VGNC:VGNC:84901
    See related
    Ensembl:ENSMMUG00000016453
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PSMD9 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (121735580..121763469)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (122199138..122228447)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 1B, histone lysine methyltransferase Neighboring gene 4-hydroxyphenylpyruvate dioxygenase Neighboring gene U7 small nuclear RNA Neighboring gene cilia and flagella associated protein 251 Neighboring gene 40S ribosomal protein S3a pseudogene Neighboring gene BAF chromatin remodeling complex subunit BCL7A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome regulatory particle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    26S proteasome non-ATPase regulatory subunit 9
    Names
    proteasome (prosome, macropain) 26S subunit, non-ATPase, 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      121735580..121763469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830019.1 → XP_028685852.1  26S proteasome non-ATPase regulatory subunit 9 isoform X2

      Conserved Domains (2) summary
      cd00989
      Location:129 → 204
      PDZ_metalloprotease; PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most PDZ ...
      pfam18265
      Location:23 → 102
      Nas2_N; Nas2 N_terminal domain

    2. XM_001096532.4 → XP_001096532.2  26S proteasome non-ATPase regulatory subunit 9 isoform X1

      UniProtKB/TrEMBL
      A0A663DB83, A0A8J8YCJ7, F7GF27, G7N617
      Related
      ENSMMUP00000021613.4, ENSMMUT00000023104.4
      Conserved Domains (1) summary
      cd00989
      Location:129 → 205
      PDZ_metalloprotease; PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most PDZ ...
    Nucleotide Protein
    Heading Accession and Version

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