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    ATXN7L3 ataxin 7 like 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714437, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATXN7L3provided by VGNC
    Official Full Name
    ataxin 7 like 3provided by VGNC
    Primary source
    VGNC:VGNC:70128
    See related
    Ensembl:ENSMMUG00000019923
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN7L3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (55454501..55462712, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (50063992..50071034, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene homologous recombination factor with OB-fold Neighboring gene ankyrin repeat and SOCS box containing 16 Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene upstream binding transcription factor Neighboring gene uncharacterized LOC106994058 Neighboring gene SHC-transforming protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DUBm complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SAGA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-7-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      55454501..55462712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836570.1 → XP_028692403.1  ataxin-7-like protein 3 isoform X9

      Conserved Domains (2) summary
      pfam08209
      Location:87 → 119
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:241 → 270
      SCA7; zinc-binding domain

    2. XM_028836571.1 → XP_028692404.1  ataxin-7-like protein 3 isoform X10

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    3. XM_028836572.1 → XP_028692405.1  ataxin-7-like protein 3 isoform X10

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    4. XM_015119848.2 → XP_014975334.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:140 → 172
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:294 → 323
      SCA7; zinc-binding domain

    5. XM_001114315.4 → XP_001114315.2  ataxin-7-like protein 3 isoform X8

      See identical proteins and their annotated locations for XP_001114315.2

      Related
      ENSMMUP00000026180.3, ENSMMUT00000027985.4
      Conserved Domains (2) summary
      pfam08209
      Location:133 → 165
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:261 → 290
      SCA7; zinc-binding domain

    6. XM_015119851.2 → XP_014975337.1  ataxin-7-like protein 3 isoform X4

      Conserved Domains (2) summary
      pfam08209
      Location:133 → 165
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:280 → 309
      SCA7; zinc-binding domain

    7. XM_001114294.4 → XP_001114294.1  ataxin-7-like protein 3 isoform X7

      See identical proteins and their annotated locations for XP_001114294.1

      Conserved Domains (2) summary
      pfam08209
      Location:133 → 165
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:268 → 297
      SCA7; zinc-binding domain

    8. XM_015119849.2 → XP_014975335.1  ataxin-7-like protein 3 isoform X3

      Conserved Domains (2) summary
      pfam08209
      Location:133 → 165
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:287 → 316
      SCA7; zinc-binding domain

    9. XM_015119853.2 → XP_014975339.1  ataxin-7-like protein 3 isoform X6

      Conserved Domains (2) summary
      pfam08209
      Location:140 → 172
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:268 → 297
      SCA7; zinc-binding domain

    10. XM_015119850.2 → XP_014975336.1  ataxin-7-like protein 3 isoform X2

      Conserved Domains (2) summary
      pfam08209
      Location:140 → 172
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:287 → 316
      SCA7; zinc-binding domain

    11. XM_015119852.2 → XP_014975338.1  ataxin-7-like protein 3 isoform X5

      Conserved Domains (2) summary
      pfam08209
      Location:140 → 172
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:275 → 304
      SCA7; zinc-binding domain
    Nucleotide Protein
    Heading Accession and Version

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