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    HPGD 15-hydroxyprostaglandin dehydrogenase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697864, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HPGDprovided by VGNC
    Official Full Name
    15-hydroxyprostaglandin dehydrogenaseprovided by VGNC
    Primary source
    VGNC:VGNC:73512
    See related
    Ensembl:ENSMMUG00000020408
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HPGD in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (171785257..171817063, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (174767739..174799500, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene phosphoglycerate kinase 1 pseudogene Neighboring gene uncharacterized LOC114678439 Neighboring gene glycine receptor alpha 3 Neighboring gene ADAM metallopeptidase domain 29

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    15-hydroxyprostaglandin dehydrogenase [NAD(+)]
    Names
    hydroxyprostaglandin dehydrogenase 15-(NAD)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      171785257..171817063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001087957.4 → XP_001087957.1  15-hydroxyprostaglandin dehydrogenase [NAD(+)]

      See identical proteins and their annotated locations for XP_001087957.1

      UniProtKB/TrEMBL
      F6U1R8, G7MSB9
      Related
      ENSMMUP00000026851.2, ENSMMUT00000028698.4
      Conserved Domains (1) summary
      cd05323
      Location:6 → 254
      ADH_SDR_c_like; insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs
    Nucleotide Protein
    Heading Accession and Version

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