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    VPS8 VPS8 subunit of CORVET complex [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701567, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VPS8provided by VGNC
    Official Full Name
    VPS8 subunit of CORVET complexprovided by VGNC
    Primary source
    VGNC:VGNC:79779
    See related
    Ensembl:ENSMMUG00000000425
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VPS8 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    50
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (90119489..90364591)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (107979403..108224240, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676138 Neighboring gene MAGE family member F1 Neighboring gene chromosome 2 C3orf70 homolog Neighboring gene small nucleolar RNA SNORD43

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endosomal vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein targeting to vacuole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CORVET complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of HOPS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 8 homolog
    Names
    VPS8, CORVET complex subunit
    vacuolar protein sorting 8 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      90119489..90364591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843908.1 → XP_028699741.1  vacuolar protein sorting-associated protein 8 homolog isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZRL4
      Conserved Domains (4) summary
      sd00039
      Location:202 → 239
      7WD40; WD40 repeat [structural motif]
      cd16687
      Location:1256 → 1310
      RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
      pfam12816
      Location:614 → 796
      Vps8; Golgi CORVET complex core vacuolar protein 8
      cl29593
      Location:197 → 298
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_028843910.1 → XP_028699743.1  vacuolar protein sorting-associated protein 8 homolog isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZRL4
      Conserved Domains (4) summary
      sd00039
      Location:202 → 239
      7WD40; WD40 repeat [structural motif]
      cd16687
      Location:1256 → 1310
      RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
      pfam12816
      Location:614 → 796
      Vps8; Golgi CORVET complex core vacuolar protein 8
      cl29593
      Location:197 → 298
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_001097319.4 → XP_001097319.2  vacuolar protein sorting-associated protein 8 homolog isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZRL4, F7ACL5, H9ESL9
      Related
      ENSMMUP00000000575.4, ENSMMUT00000000624.4
      Conserved Domains (4) summary
      sd00039
      Location:202 → 239
      7WD40; WD40 repeat [structural motif]
      cd16687
      Location:1256 → 1310
      RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
      pfam12816
      Location:614 → 796
      Vps8; Golgi CORVET complex core vacuolar protein 8
      cl29593
      Location:197 → 298
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_001097106.4 → XP_001097106.2  vacuolar protein sorting-associated protein 8 homolog isoform X4

      UniProtKB/TrEMBL
      A0A1D5QZ39, A0A5F7ZRL4, A0A5S6R6T2, A0A8J8Y2L6, G7MJ44
      Related
      ENSMMUP00000053321.2, ENSMMUT00000074179.2
      Conserved Domains (4) summary
      sd00039
      Location:200 → 237
      7WD40; WD40 repeat [structural motif]
      cd16687
      Location:1254 → 1308
      RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
      pfam12816
      Location:612 → 794
      Vps8; Golgi CORVET complex core vacuolar protein 8
      cl29593
      Location:195 → 296
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    5. XM_028843909.1 → XP_028699742.1  vacuolar protein sorting-associated protein 8 homolog isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZRL4
      Conserved Domains (4) summary
      sd00039
      Location:200 → 237
      7WD40; WD40 repeat [structural motif]
      cd16687
      Location:1254 → 1308
      RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
      pfam12816
      Location:612 → 794
      Vps8; Golgi CORVET complex core vacuolar protein 8
      cl29593
      Location:195 → 296
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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