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    PTBP2 polypyrimidine tract binding protein 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710101, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PTBP2provided by VGNC
    Official Full Name
    polypyrimidine tract binding protein 2provided by VGNC
    Primary source
    VGNC:VGNC:76280
    See related
    Ensembl:ENSMMUG00000016130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PTBP2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (127335766..127429963, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (97465577..97559755)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678173 Neighboring gene sorting nexin-7 Neighboring gene NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like Neighboring gene 60S ribosomal protein L17 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polypyrimidine tract-binding protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      127335766..127429963 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145532.2 → XP_015001018.1  polypyrimidine tract-binding protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A5F8AAB8, F7HG41, H9FXV6
      Related
      ENSMMUP00000039659.2, ENSMMUT00000046622.3
      Conserved Domains (1) summary
      TIGR01649
      Location:57 → 531
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    2. XM_015145530.2 → XP_015001016.1  polypyrimidine tract-binding protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AAB8
      Conserved Domains (1) summary
      TIGR01649
      Location:57 → 532
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    3. XM_001105316.4 → XP_001105316.2  polypyrimidine tract-binding protein 2 isoform X2

      See identical proteins and their annotated locations for XP_001105316.2

      UniProtKB/TrEMBL
      A0A5F8AAB8
      Conserved Domains (1) summary
      TIGR01649
      Location:57 → 536
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    4. XM_015145542.2 → XP_015001028.1  polypyrimidine tract-binding protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A5F8AAB8
      Related
      ENSMMUP00000073902.1, ENSMMUT00000085620.1
      Conserved Domains (1) summary
      TIGR01649
      Location:5 → 485
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    5. XM_015145526.2 → XP_015001012.1  polypyrimidine tract-binding protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AAB8
      Conserved Domains (1) summary
      TIGR01649
      Location:57 → 537
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family
    Nucleotide Protein
    Heading Accession and Version

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