U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    APIP APAF1 interacting protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717291, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    APIPprovided by VGNC
    Official Full Name
    APAF1 interacting proteinprovided by VGNC
    Primary source
    VGNC:VGNC:99543
    See related
    Ensembl:ENSMMUG00000006447
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See APIP in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (30540783..30580517)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (30988836..31028336)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993295 Neighboring gene uncharacterized LOC106993296 Neighboring gene pyruvate dehydrogenase complex component X Neighboring gene ETS homologous factor Neighboring gene E74 like ETS transcription factor 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methylthioribulose 1-phosphate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-methionine salvage from methylthioadenosine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    methylthioribulose-1-phosphate dehydratase
    Names
    putative methylthioribulose-1-phosphate dehydratase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      30540783..30580517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114543.2 → XP_014970029.2  methylthioribulose-1-phosphate dehydratase isoform X2

      UniProtKB/TrEMBL
      A0A5K1VIZ5, F7HS49, H9YYX4, I2CTP3
      Related
      ENSMMUP00000008497.4, ENSMMUT00000009042.4
      Conserved Domains (1) summary
      TIGR03328
      Location:28 → 227
      salvage_mtnB; methylthioribulose-1-phosphate dehydratase

    2. XM_028833523.1 → XP_028689356.1  methylthioribulose-1-phosphate dehydratase isoform X4

      UniProtKB/TrEMBL
      A0A5K1VIZ5
      Conserved Domains (1) summary
      cl00214
      Location:28 → 206
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...

    3. XM_015114544.2 → XP_014970030.1  methylthioribulose-1-phosphate dehydratase isoform X3

      UniProtKB/TrEMBL
      A0A5K1VIZ5
      Conserved Domains (1) summary
      cl00214
      Location:35 → 213
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...

    4. XM_015114542.2 → XP_014970028.1  methylthioribulose-1-phosphate dehydratase isoform X1

      UniProtKB/TrEMBL
      A0A5K1VIZ5
      Conserved Domains (1) summary
      TIGR03328
      Location:35 → 234
      salvage_mtnB; methylthioribulose-1-phosphate dehydratase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials