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    SBNO1 strawberry notch homolog 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709260, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SBNO1provided by VGNC
    Official Full Name
    strawberry notch homolog 1provided by VGNC
    Primary source
    VGNC:VGNC:77084
    Locus tag
    EGK_04321
    See related
    Ensembl:ENSMMUG00000011496
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SBNO1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (123169802..123255250, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (123300843..123382996, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 9 Neighboring gene mitochondrial translation release factor in rescue Neighboring gene cyclin dependent kinase 2 associated protein 1 Neighboring gene lysine methyltransferase 5A Neighboring gene Rab interacting lysosomal protein like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein strawberry notch homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      123169802..123255250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015109611.2 → XP_014965097.2  protein strawberry notch homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A5K1VKF2
      Conserved Domains (2) summary
      pfam13871
      Location:873 → 1149
      Helicase_C_4; C-terminal domain on Strawberry notch homolog
      pfam13872
      Location:259 → 561
      AAA_34; P-loop containing NTP hydrolase pore-1

    2. XM_015109616.2 → XP_014965102.2  protein strawberry notch homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A5K1VKF2
      Conserved Domains (2) summary
      pfam13871
      Location:870 → 1146
      Helicase_C_4; C-terminal domain on Strawberry notch homolog
      pfam13872
      Location:256 → 558
      AAA_34; P-loop containing NTP hydrolase pore-1

    3. XM_015109613.2 → XP_014965099.2  protein strawberry notch homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A5K1VKF2
      Conserved Domains (2) summary
      pfam13871
      Location:872 → 1148
      Helicase_C_4; C-terminal domain on Strawberry notch homolog
      pfam13872
      Location:258 → 560
      AAA_34; P-loop containing NTP hydrolase pore-1

    4. XM_015109614.2 → XP_014965100.2  protein strawberry notch homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A5K1VKF2
      Conserved Domains (2) summary
      pfam13871
      Location:871 → 1147
      Helicase_C_4; C-terminal domain on Strawberry notch homolog
      pfam13872
      Location:257 → 559
      AAA_34; P-loop containing NTP hydrolase pore-1

    5. XM_028830087.1 → XP_028685920.1  protein strawberry notch homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A5K1VKF2
      Related
      ENSMMUP00000015087.4, ENSMMUT00000016098.4
      Conserved Domains (2) summary
      pfam13871
      Location:869 → 1145
      Helicase_C_4; C-terminal domain on Strawberry notch homolog
      pfam13872
      Location:255 → 557
      AAA_34; P-loop containing NTP hydrolase pore-1
    Nucleotide Protein
    Heading Accession and Version

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