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    STAMBPL1 STAM binding protein like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694629, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STAMBPL1provided by VGNC
    Official Full Name
    STAM binding protein like 1provided by VGNC
    Primary source
    VGNC:VGNC:77982
    See related
    Ensembl:ENSMMUG00000009339
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STAMBPL1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (89142359..89188327)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (84056925..84104398)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene RCC1 and BTB domain-containing protein 2-like Neighboring gene lipase family member M Neighboring gene ankyrin repeat domain 22 Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal-dependent deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K63-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AMSH-like protease
    NP_001247946.1
    XP_028709085.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261017.1 → NP_001247946.1  AMSH-like protease

      See identical proteins and their annotated locations for NP_001247946.1

      Status: PROVISIONAL

      Source sequence(s)
      JU321699
      UniProtKB/TrEMBL
      F7EC45, F7HJK2
      Related
      ENSMMUP00000035777.1, ENSMMUT00000042767.3
      Conserved Domains (3) summary
      cd08066
      Location:266 → 436
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      COG0544
      Location:119 → 197
      Tig; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
      pfam08969
      Location:22 → 129
      USP8_dimer; USP8 dimerization domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      89142359..89188327
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028853252.1 → XP_028709085.1  AMSH-like protease isoform X1

      UniProtKB/TrEMBL
      F7EC45, F7HJK2
      Conserved Domains (3) summary
      cd08066
      Location:266 → 436
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      COG0544
      Location:119 → 197
      Tig; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
      pfam08969
      Location:22 → 129
      USP8_dimer; USP8 dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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