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    BBS5 Bardet-Biedl syndrome 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709701, updated on 20-Oct-2024

    Summary

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    Gene symbol
    BBS5
    Gene description
    Bardet-Biedl syndrome 5
    See related
    Ensembl:ENSMMUG00000020510
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BBS5 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (56580467..56605219)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (56417429..56442277)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene LDL receptor related protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene kelch like family member 41 Neighboring gene FAST kinase domains 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BBSome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BBSome complex member BBS5; Bardet-Biedl syndrome 5 protein
    Names
    bardet-Biedl syndrome 5 protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194768.3 → NP_001181697.1  BBSome complex member BBS5

      See identical proteins and their annotated locations for NP_001181697.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000079
      UniProtKB/TrEMBL
      A0A5F8A0K9, F7GM39
      Related
      ENSMMUP00000071445.1, ENSMMUT00000084357.1
      Conserved Domains (1) summary
      pfam07289
      Location:7 → 318
      BBL5; Bardet-Biedl syndrome 5 protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      56580467..56605219
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001098260.4 → XP_001098260.1  Bardet-Biedl syndrome 5 protein isoform X2

      See identical proteins and their annotated locations for XP_001098260.1

      UniProtKB/TrEMBL
      F7GM39, H9Z224
      Related
      ENSMMUP00000068966.1, ENSMMUT00000095228.1
      Conserved Domains (1) summary
      pfam07289
      Location:7 → 339
      BBL5; Bardet-Biedl syndrome 5 protein

    2. XM_015110258.2 → XP_014965744.1  Bardet-Biedl syndrome 5 protein isoform X5

      UniProtKB/TrEMBL
      F7GM39
      Conserved Domains (1) summary
      pfam07289
      Location:1 → 318
      BBL5; Bardet-Biedl syndrome 5 protein

    3. XM_015110256.2 → XP_014965742.1  Bardet-Biedl syndrome 5 protein isoform X4

      UniProtKB/TrEMBL
      F7GM39
      Conserved Domains (1) summary
      pfam07289
      Location:3 → 321
      BBL5; Bardet-Biedl syndrome 5 protein

    4. XM_028830552.1 → XP_028686385.1  Bardet-Biedl syndrome 5 protein isoform X3

      UniProtKB/TrEMBL
      F7GM39
      Conserved Domains (1) summary
      pfam07289
      Location:15 → 326
      BBL5; Bardet-Biedl syndrome 5 protein

    5. XM_015110255.2 → XP_014965741.1  Bardet-Biedl syndrome 5 protein isoform X1

      UniProtKB/TrEMBL
      F7GM39
      Related
      ENSMMUP00000038199.3, ENSMMUT00000045183.3
      Conserved Domains (1) summary
      pfam07289
      Location:29 → 347
      BBL5; Bardet-Biedl syndrome 5 protein

    6. XM_015110259.2 → XP_014965745.1  Bardet-Biedl syndrome 5 protein isoform X6

      UniProtKB/TrEMBL
      F7GM39
      Conserved Domains (1) summary
      pfam07289
      Location:1 → 317
      BBL5; Bardet-Biedl syndrome 5 protein
    Nucleotide Protein
    Heading Accession and Version

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