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    SETD6 SET domain containing 6, protein lysine methyltransferase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707353, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SETD6provided by VGNC
    Official Full Name
    SET domain containing 6, protein lysine methyltransferaseprovided by VGNC
    Primary source
    VGNC:VGNC:77313
    See related
    Ensembl:ENSMMUG00000014621
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SETD6 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (45762474..45768253)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (42733800..42738719)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene GINS complex subunit 3 Neighboring gene NDRG family member 4 Neighboring gene U6 spliceosomal RNA Neighboring gene CCR4-NOT transcription complex subunit 1 Neighboring gene small nucleolar RNA SNORA46 Neighboring gene small nucleolar RNA SNORA50

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-lysine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine monomethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    N-lysine methyltransferase SETD6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      45762474..45768253
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841194.1 → XP_028697027.1  N-lysine methyltransferase SETD6 isoform X4

      Conserved Domains (2) summary
      PHA03378
      Location:8 → 130
      PHA03378; EBNA-3B; Provisional
      pfam09273
      Location:229 → 357
      Rubis-subs-bind; Rubisco LSMT substrate-binding

    2. XM_015126309.2 → XP_014981795.1  N-lysine methyltransferase SETD6 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHS7, A0A5F7ZXE4
      Related
      ENSMMUP00000064184.1, ENSMMUT00000081501.1
      Conserved Domains (2) summary
      pfam00856
      Location:352 → 391
      SET; SET domain
      pfam09273
      Location:443 → 570
      Rubis-subs-bind; Rubisco LSMT substrate-binding

    3. XM_001102146.4 → XP_001102146.1  N-lysine methyltransferase SETD6 isoform X2

      UniProtKB/TrEMBL
      F7GNI2
      Conserved Domains (2) summary
      pfam00856
      Location:248 → 287
      SET; SET domain
      pfam09273
      Location:339 → 466
      Rubis-subs-bind; Rubisco LSMT substrate-binding

    4. XM_001102235.4 → XP_001102235.1  N-lysine methyltransferase SETD6 isoform X3

      UniProtKB/TrEMBL
      G7NPW6
      Related
      ENSMMUP00000019187.3, ENSMMUT00000020502.4
      Conserved Domains (2) summary
      pfam00856
      Location:223 → 262
      SET; SET domain
      pfam09273
      Location:314 → 441
      Rubis-subs-bind; Rubisco LSMT substrate-binding

    RNA

    1. XR_003725520.1 RNA Sequence

    2. XR_003725523.1 RNA Sequence

      Related
      ENSMMUT00000093164.1

    3. XR_003725524.1 RNA Sequence

      Related
      ENSMMUT00000082519.1

    4. XR_003725522.1 RNA Sequence

    5. XR_003725519.1 RNA Sequence

    6. XR_003725521.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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