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    ABCA13 ATP binding cassette subfamily A member 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695208, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ABCA13provided by VGNC
    Official Full Name
    ATP binding cassette subfamily A member 13provided by VGNC
    Primary source
    VGNC:VGNC:69402
    See related
    Ensembl:ENSMMUG00000016191
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ABCA13 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    62
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (66652278..67170434, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (60124347..60620026, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676919 Neighboring gene uncharacterized LOC106997427 Neighboring gene cell division cycle 14C Neighboring gene chromosome 3 C7orf57 homolog Neighboring gene uridine phosphorylase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-binding cassette sub-family A member 13
    Names
    ATP-binding cassette sub-family A member 13-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      66652278..67170434 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845780.1 → XP_028701613.1  ATP-binding cassette sub-family A member 13 isoform X2

      UniProtKB/TrEMBL
      F7FQ43
      Related
      ENSMMUP00000021279.4, ENSMMUT00000022752.4
      Conserved Domains (1) summary
      TIGR01257
      Location:3066 → 5047
      rim_protein; retinal-specific rim ABC transporter

    2. XM_015133567.2 → XP_014989053.2  ATP-binding cassette sub-family A member 13 isoform X1

      Conserved Domains (1) summary
      TIGR01257
      Location:2911 → 4024
      rim_protein; retinal-specific rim ABC transporter
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials