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    CSMD2 CUB and Sushi multiple domains 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710468, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CSMD2provided by VGNC
    Official Full Name
    CUB and Sushi multiple domains 2provided by VGNC
    Primary source
    VGNC:VGNC:71441
    See related
    Ensembl:ENSMMUG00000002741
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CSMD2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    71
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (190464462..191114688)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (32661768..33184048, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678297 Neighboring gene uncharacterized LOC114673099 Neighboring gene chromosome 1 C1orf94 homolog Neighboring gene uncharacterized LOC106997650 Neighboring gene uncharacterized LOC106997630 Neighboring gene high mobility group box 4 Neighboring gene proteasome subunit alpha type-3-like Neighboring gene zinc finger and SCAN domain containing 20 Neighboring gene uncharacterized LOC114673124 Neighboring gene polyhomeotic homolog 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CUB and sushi domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      190464462..191114688
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134758.2 → XP_014990244.2  CUB and sushi domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F7GQF1
      Conserved Domains (6) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:179 → 236
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2767 → 3007
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1485 → 1590
      CUB; CUB domain
      pfam00084
      Location:2292 → 2349
      Sushi; Sushi repeat (SCR repeat)

    2. XM_028836225.1 → XP_028692058.1  CUB and sushi domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      F7GQF1
      Conserved Domains (7) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:179 → 236
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2747 → 2987
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:445 → 553
      CUB; CUB domain
      cl00049
      Location:1485 → 1570
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00084
      Location:2272 → 2329
      Sushi; Sushi repeat (SCR repeat)

    3. XM_015134767.2 → XP_014990253.2  CUB and sushi domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      F7GQF5
      Related
      ENSMMUP00000040438.3, ENSMMUT00000047404.3
      Conserved Domains (6) summary
      cd00033
      Location:1876 → 1932
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:179 → 236
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2522 → 2762
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:373 → 480
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1240 → 1345
      CUB; CUB domain
      pfam00084
      Location:2047 → 2104
      Sushi; Sushi repeat (SCR repeat)

    4. XM_028836217.1 → XP_028692050.1  CUB and sushi domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F7GQF1
      Conserved Domains (6) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:179 → 236
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2767 → 3007
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1485 → 1590
      CUB; CUB domain
      pfam00084
      Location:2292 → 2349
      Sushi; Sushi repeat (SCR repeat)

    5. XM_015134762.2 → XP_014990248.2  CUB and sushi domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      F7GQF1, F7HKN4
      Related
      ENSMMUP00000003683.4, ENSMMUT00000003898.4
      Conserved Domains (6) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:179 → 236
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2767 → 3007
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1485 → 1590
      CUB; CUB domain
      pfam00084
      Location:2292 → 2349
      Sushi; Sushi repeat (SCR repeat)

    6. XM_015134773.2 → XP_014990259.2  CUB and sushi domain-containing protein 2 isoform X6

      Conserved Domains (6) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:2121 → 2176
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2524 → 2767
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1485 → 1590
      CUB; CUB domain
      pfam00084
      Location:2292 → 2349
      Sushi; Sushi repeat (SCR repeat)

    7. XM_028836229.1 → XP_028692062.1  CUB and sushi domain-containing protein 2 isoform X5

      UniProtKB/TrEMBL
      F7GQF1
      Conserved Domains (6) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:179 → 236
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2767 → 3007
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1485 → 1590
      CUB; CUB domain
      pfam00084
      Location:2292 → 2349
      Sushi; Sushi repeat (SCR repeat)

    8. XM_028836235.1 → XP_028692068.1  CUB and sushi domain-containing protein 2 isoform X6

      Conserved Domains (6) summary
      cd00033
      Location:561 → 615
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:2121 → 2176
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:2524 → 2767
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:618 → 725
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00431
      Location:1485 → 1590
      CUB; CUB domain
      pfam00084
      Location:2292 → 2349
      Sushi; Sushi repeat (SCR repeat)
    Nucleotide Protein
    Heading Accession and Version

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