U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714371, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    GALNT2provided by VGNC
    Official Full Name
    polypeptide N-acetylgalactosaminyltransferase 2provided by VGNC
    Primary source
    VGNC:VGNC:72872
    See related
    Ensembl:ENSMMUG00000002285
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GALNT2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (18724639..18942636, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (206224420..206441107)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994991 Neighboring gene piggyBac transposable element derived 5 Neighboring gene uncharacterized LOC114678936 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC106994983

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 2
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)
    NP_001248284.1
    XP_028700869.1
    XP_028700871.1
    XP_028700875.1
    XP_028700880.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261355.1 → NP_001248284.1  polypeptide N-acetylgalactosaminyltransferase 2 precursor

      See identical proteins and their annotated locations for NP_001248284.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044453
      UniProtKB/TrEMBL
      A0A1D5RIQ7, H9F9K6
      Related
      ENSMMUP00000060201.1, ENSMMUT00000073619.2
      Conserved Domains (2) summary
      cd02510
      Location:139 → 434
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:446 → 563
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      18724639..18942636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845038.1 → XP_028700871.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X2

      UniProtKB/TrEMBL
      G7MFR6
      Conserved Domains (2) summary
      cd02510
      Location:98 → 393
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:415 → 522
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    2. XM_028845036.1 → XP_028700869.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X1

      UniProtKB/TrEMBL
      F7B3H7, G7MFR6
      Related
      ENSMMUP00000003056.4, ENSMMUT00000003236.4
      Conserved Domains (2) summary
      cd02510
      Location:103 → 398
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:420 → 527
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    3. XM_028845042.1 → XP_028700875.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X3

      UniProtKB/TrEMBL
      G7MFR6
      Conserved Domains (2) summary
      cd02510
      Location:49 → 344
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:356 → 473
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    4. XM_028845047.1 → XP_028700880.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X3

      UniProtKB/TrEMBL
      G7MFR6
      Conserved Domains (2) summary
      cd02510
      Location:49 → 344
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:356 → 473
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.