U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SIPA1L1 signal induced proliferation associated 1 like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694485, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SIPA1L1provided by VGNC
    Official Full Name
    signal induced proliferation associated 1 like 1provided by VGNC
    Primary source
    VGNC:VGNC:77284
    See related
    Ensembl:ENSMMUG00000020067
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SIPA1L1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (133446472..133855518)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (133601991..134015179)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100428691 Neighboring gene uncharacterized LOC106999484 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene PDZ domain-containing protein 11 pseudogene Neighboring gene uncharacterized LOC106999483 Neighboring gene regulator of G protein signaling 6 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene double PHD fingers 3 Neighboring gene uncharacterized LOC114679596

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    signal-induced proliferation-associated 1-like protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266525.1 → NP_001253454.1  signal-induced proliferation-associated 1-like protein 1

      See identical proteins and their annotated locations for NP_001253454.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322281
      UniProtKB/TrEMBL
      A0A5F8AQY4, H9EUH8
      Related
      ENSMMUP00000047158.2, ENSMMUT00000058693.2
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      pfam06005
      Location:1737 → 1792
      DUF904; Protein of unknown function (DUF904)
      pfam11881
      Location:1504 → 1749
      SPAR_C; C-terminal domain of SPAR protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      133446472..133855518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850188.1 → XP_028706021.1  signal-induced proliferation-associated 1-like protein 1 isoform X5

      Conserved Domains (3) summary
      cd00992
      Location:459 → 529
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam02145
      Location:135 → 315
      Rap_GAP; Rap/ran-GAP
      pfam11881
      Location:1010 → 1255
      SPAR_C; C-terminal domain of SPAR protein

    2. XM_028850187.1 → XP_028706020.1  signal-induced proliferation-associated 1-like protein 1 isoform X5

      Conserved Domains (3) summary
      cd00992
      Location:459 → 529
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam02145
      Location:135 → 315
      Rap_GAP; Rap/ran-GAP
      pfam11881
      Location:1010 → 1255
      SPAR_C; C-terminal domain of SPAR protein

    3. XM_028850184.1 → XP_028706017.1  signal-induced proliferation-associated 1-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AQY4
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam11881
      Location:1504 → 1748
      SPAR_C; C-terminal domain of SPAR protein
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      cl11531
      Location:1736 → 1791
      ZapB; Cell division protein ZapB

    4. XM_028850186.1 → XP_028706019.1  signal-induced proliferation-associated 1-like protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8AQY4
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam11881
      Location:1483 → 1727
      SPAR_C; C-terminal domain of SPAR protein
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      cl11531
      Location:1715 → 1770
      ZapB; Cell division protein ZapB

    5. XM_028850185.1 → XP_028706018.1  signal-induced proliferation-associated 1-like protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AQY4, F7AG45, F7GQU2
      Related
      ENSMMUP00000032764.3, ENSMMUT00000039698.3
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      pfam06005
      Location:1716 → 1771
      ZapB; Cell division protein ZapB
      pfam11881
      Location:1483 → 1728
      SPAR_C; C-terminal domain of SPAR protein

    6. XM_015144005.2 → XP_014999491.2  signal-induced proliferation-associated 1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QGI8, A0A5F8AQY4, A0A5S6RDF8, A0A8J8XYU8, G7MYK5
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      pfam06005
      Location:1737 → 1792
      ZapB; Cell division protein ZapB
      pfam11881
      Location:1504 → 1749
      SPAR_C; C-terminal domain of SPAR protein

    7. XM_015144009.2 → XP_014999495.2  signal-induced proliferation-associated 1-like protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8AQY4
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam11881
      Location:1483 → 1727
      SPAR_C; C-terminal domain of SPAR protein
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      cl11531
      Location:1715 → 1770
      ZapB; Cell division protein ZapB

    8. XM_015144004.2 → XP_014999490.2  signal-induced proliferation-associated 1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QGI8, A0A5F8AQY4, A0A5S6RDF8, A0A8J8XYU8, G7MYK5
      Conserved Domains (4) summary
      cd00992
      Location:953 → 1023
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam02145
      Location:629 → 809
      Rap_GAP; Rap/ran-GAP
      pfam06005
      Location:1737 → 1792
      ZapB; Cell division protein ZapB
      pfam11881
      Location:1504 → 1749
      SPAR_C; C-terminal domain of SPAR protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.