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    VANGL1 VANGL planar cell polarity protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709730, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VANGL1provided by VGNC
    Official Full Name
    VANGL planar cell polarity protein 1provided by VGNC
    Primary source
    VGNC:VGNC:78976
    See related
    Ensembl:ENSMMUG00000008967
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VANGL1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (108552111..108608714, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (116722517..116779214)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene nescient helix-loop-helix 2 Neighboring gene calsequestrin 2 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene tetraspanin-12 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vang-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      108552111..108608714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830038.1 → XP_028685871.1  vang-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QXV4, F7EQX6, H9YZ43
      Related
      ENSMMUP00000052884.2, ENSMMUT00000076543.2
      Conserved Domains (1) summary
      pfam06638
      Location:25 → 524
      Strabismus; Strabismus protein

    2. XM_028830043.1 → XP_028685876.1  vang-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QXV4, F7EQX6, H9YZ43
      Related
      ENSMMUP00000011750.4, ENSMMUT00000012531.4
      Conserved Domains (1) summary
      pfam06638
      Location:25 → 524
      Strabismus; Strabismus protein

    3. XM_028830047.1 → XP_028685880.1  vang-like protein 1 isoform X2

      UniProtKB/TrEMBL
      F7EQX6
      Conserved Domains (1) summary
      pfam06638
      Location:58 → 513
      Strabismus; Strabismus protein
    Nucleotide Protein
    Heading Accession and Version

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