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    NUP153 nucleoporin 153 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703888, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NUP153provided by VGNC
    Official Full Name
    nucleoporin 153provided by VGNC
    Primary source
    VGNC:VGNC:75559
    See related
    Ensembl:ENSMMUG00000001993
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NUP153 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (152227095..152335410)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (18026951..18136383, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 13A Neighboring gene small nuclear ribonucleoprotein E pseudogene Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene small ubiquitin-related modifier 2 pseudogene Neighboring gene family with sequence similarity 8 member A1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear pore complex protein Nup153

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261594.1 → NP_001248523.1  nuclear pore complex protein Nup153

      See identical proteins and their annotated locations for NP_001248523.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048866
      UniProtKB/TrEMBL
      A0A5K1URX5, H9ZG48
      Related
      ENSMMUP00000002669.4, ENSMMUT00000002825.4
      Conserved Domains (4) summary
      sd00025
      Location:662 → 681
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:851 → 880
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam08604
      Location:113 → 629
      Nup153; Nucleoporin Nup153-like
      pfam10599
      Location:1386 → 1474
      Nup_retrotrp_bd; Retro-transposon transporting motif

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      152227095..152335410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135559.2 → XP_014991045.2  nuclear pore complex protein Nup153 isoform X2

      UniProtKB/TrEMBL
      F6V9C1
      Conserved Domains (4) summary
      sd00025
      Location:523 → 542
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:712 → 741
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam08604
      Location:4 → 482
      Nup153; Nucleoporin Nup153-like
      pfam10599
      Location:1247 → 1335
      Nup_retrotrp_bd; Retro-transposon transporting motif

    2. XM_015135560.2 → XP_014991046.2  nuclear pore complex protein Nup153 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZZ24
      Conserved Domains (4) summary
      sd00025
      Location:662 → 681
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:851 → 880
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam08604
      Location:113 → 621
      Nup153; Nucleoporin Nup153-like
      pfam10599
      Location:1139 → 1227
      Nup_retrotrp_bd; Retro-transposon transporting motif

    3. XM_015135558.2 → XP_014991044.2  nuclear pore complex protein Nup153 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R0K3, F6V9A5, I0FWW1
      Related
      ENSMMUP00000053836.2, ENSMMUT00000079162.2
      Conserved Domains (4) summary
      sd00025
      Location:644 → 663
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:833 → 862
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam08604
      Location:113 → 603
      Nup153; Nucleoporin Nup153-like
      pfam10599
      Location:1368 → 1456
      Nup_retrotrp_bd; Retro-transposon transporting motif
    Nucleotide Protein
    Heading Accession and Version

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