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    ZNF559 zinc finger protein 559 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709955, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF559provided by VGNC
    Official Full Name
    zinc finger protein 559provided by VGNC
    Primary source
    VGNC:VGNC:79690
    See related
    Ensembl:ENSMMUG00000018884
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See ZNF559 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (9132866..9140979)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (9351839..9405886)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 7D4-like Neighboring gene zinc finger protein 699 Neighboring gene UBX domain-containing protein 2A pseudogene Neighboring gene zinc finger protein 177 Neighboring gene zinc finger protein 266

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 559

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      9132866..9140979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839449.1 → XP_028695282.1  zinc finger protein 559 isoform X2

      UniProtKB/TrEMBL
      A0A5S6RC34, A0A8J8XN42, F7ABK6, F7FR74, G7NNC1
      Related
      ENSMMUP00000031865.3, ENSMMUT00000038786.3
      Conserved Domains (5) summary
      COG5048
      Location:289 → 455
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:297 → 317
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:147 → 177
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:13 → 54
      KRAB; KRAB box
      pfam13465
      Location:478 → 502
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015122774.2 → XP_014978260.2  zinc finger protein 559 isoform X1

      Conserved Domains (5) summary
      COG5048
      Location:317 → 483
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:325 → 345
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:175 → 205
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:41 → 82
      KRAB; KRAB box
      pfam13465
      Location:506 → 530
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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