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    ZNF317 zinc finger protein 317 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713200, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF317provided by VGNC
    Official Full Name
    zinc finger protein 317provided by VGNC
    Primary source
    VGNC:VGNC:78930
    Locus tag
    EGK_10056
    See related
    Ensembl:ENSMMUG00000020841
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF317 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (8934987..8959181)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (9166695..9190804)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene mucin 16, cell surface associated Neighboring gene olfactory receptor family 1 subfamily M member 1 Neighboring gene uncharacterized LOC106994630 Neighboring gene olfactory receptor 7D2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 317

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      8934987..8959181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122770.2 → XP_014978256.1  zinc finger protein 317 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:129 → 476
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:411 → 431
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015122768.2 → XP_014978254.1  zinc finger protein 317 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZUH0, A0A8J8XKV6, F7HQM2, G7NNB5
      Related
      ENSMMUP00000027427.3, ENSMMUT00000029314.4
      Conserved Domains (5) summary
      smart00349
      Location:57 → 109
      KRAB; krueppel associated box
      COG5048
      Location:222 → 569
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:504 → 524
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:57 → 96
      KRAB; KRAB box
      pfam13465
      Location:517 → 540
      zf-H2C2_2; Zinc-finger double domain

    3. XM_015122769.2 → XP_014978255.1  zinc finger protein 317 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AJ67
      Related
      ENSMMUP00000076983.1, ENSMMUT00000106106.1
      Conserved Domains (5) summary
      smart00349
      Location:57 → 103
      KRAB; krueppel associated box
      COG5048
      Location:190 → 537
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:472 → 492
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:57 → 96
      KRAB; KRAB box
      pfam13465
      Location:485 → 508
      zf-H2C2_2; Zinc-finger double domain

    RNA

    1. XR_003725243.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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