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    DDX20 DEAD-box helicase 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704731, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDX20provided by VGNC
    Official Full Name
    DEAD-box helicase 20provided by VGNC
    Primary source
    VGNC:VGNC:99881
    See related
    Ensembl:ENSMMUG00000014489
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDX20 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (112425855..112453614, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (112710106..112738105)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671275 Neighboring gene potassium voltage-gated channel subfamily D member 3 Neighboring gene inka box actin regulator 2 Neighboring gene RAP1A, member of RAS oncogene family

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SMN complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX20
    Names
    putative ATP-dependent RNA helicase DDX20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      112425855..112453614 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830390.1 → XP_028686223.1  probable ATP-dependent RNA helicase DDX20 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZIQ0
      Conserved Domains (2) summary
      COG0513
      Location:87 → 509
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17943
      Location:99 → 291
      DEADc_DDX20; DEAD-box helicase domain of DEAD box protein 20

    2. XM_028830395.1 → XP_028686228.1  probable ATP-dependent RNA helicase DDX20 isoform X2

      UniProtKB/TrEMBL
      F7GH80, G7MIH8
      Conserved Domains (2) summary
      COG0513
      Location:61 → 483
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17943
      Location:73 → 265
      DEADc_DDX20; DEAD-box helicase domain of DEAD box protein 20

    3. XM_015148278.2 → XP_015003764.2  probable ATP-dependent RNA helicase DDX20 isoform X2

      UniProtKB/TrEMBL
      F7GH80, G7MIH8
      Related
      ENSMMUP00000019024.4, ENSMMUT00000020325.4
      Conserved Domains (2) summary
      COG0513
      Location:61 → 483
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17943
      Location:73 → 265
      DEADc_DDX20; DEAD-box helicase domain of DEAD box protein 20
    Nucleotide Protein
    Heading Accession and Version

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