U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CNP 2',3'-cyclic nucleotide 3' phosphodiesterase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 641337, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CNPprovided by VGNC
    Official Full Name
    2',3'-cyclic nucleotide 3' phosphodiesteraseprovided by VGNC
    Primary source
    VGNC:VGNC:71279
    See related
    Ensembl:ENSMMUG00000016114
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CNP in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (53090947..53102448)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (47813581..47820441)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673154 Neighboring gene ATP citrate lyase Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene DnaJ heat shock protein family (Hsp40) member C7 Neighboring gene NFKB inhibitor interacting Ras like 2 Neighboring gene chromosome 16 C17orf113 homolog Neighboring gene zinc finger protein 385C

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cyclic nucleotide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    2',3'-cyclic-nucleotide 3'-phosphodiesterase
    Names
    2', 3'-cyclic nucleotide phosphodiesterase
    cyclic-CMP phosphodiesterase
    NP_001030605.2
    XP_028691293.1
    XP_028691294.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035528.3 → NP_001030605.2  2',3'-cyclic-nucleotide 3'-phosphodiesterase

      Status: VALIDATED

      Source sequence(s)
      QNVO02000163
      UniProtKB/TrEMBL
      F7GIP5, H9Z590, Q3LRT1
      Related
      ENSMMUP00000072014.1, ENSMMUT00000086462.1
      Conserved Domains (2) summary
      pfam05881
      Location:187 → 399
      CNPase; 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
      cl26098
      Location:52 → 166
      AAA_33; AAA domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      53090947..53102448
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835460.1 → XP_028691293.1  2',3'-cyclic-nucleotide 3'-phosphodiesterase isoform X1

      UniProtKB/TrEMBL
      A0A1D5R6V1, A0A5F8AC08
      Conserved Domains (3) summary
      pfam05881
      Location:167 → 379
      CNPase; 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
      pfam13671
      Location:32 → 146
      AAA_33; AAA domain
      cl38914
      Location:369 → 400
      NP-I; nucleoside phosphorylase-I family

    2. XM_028835461.1 → XP_028691294.1  2',3'-cyclic-nucleotide 3'-phosphodiesterase isoform X1

      UniProtKB/TrEMBL
      A0A1D5R6V1, A0A5F8AC08
      Related
      ENSMMUP00000074505.1, ENSMMUT00000104008.1
      Conserved Domains (3) summary
      pfam05881
      Location:167 → 379
      CNPase; 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
      pfam13671
      Location:32 → 146
      AAA_33; AAA domain
      cl38914
      Location:369 → 400
      NP-I; nucleoside phosphorylase-I family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.