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    GPBP1 GC-rich promoter binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708322, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GPBP1provided by VGNC
    Official Full Name
    GC-rich promoter binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:73033
    See related
    Ensembl:ENSMMUG00000014647
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GPBP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (55518240..55605337)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (58179515..58265765)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C12orf29 homolog pseudogene Neighboring gene uncharacterized LOC106998775 Neighboring gene pre-rRNA-processing protein TSR1 homolog pseudogene Neighboring gene sal-like protein 4 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vasculin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      55518240..55605337
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140088.2 → XP_014995574.1  vasculin isoform X1

      UniProtKB/TrEMBL
      F7FZ98, G7MTS5
      Conserved Domains (1) summary
      pfam15337
      Location:398 → 477
      Vasculin; Vascular protein family Vasculin-like 1

    2. XM_015140087.2 → XP_014995573.1  vasculin isoform X1

      UniProtKB/TrEMBL
      F7FZ98, G7MTS5
      Conserved Domains (1) summary
      pfam15337
      Location:398 → 477
      Vasculin; Vascular protein family Vasculin-like 1

    3. XM_028849446.1 → XP_028705279.1  vasculin isoform X3

      Conserved Domains (1) summary
      pfam15337
      Location:207 → 286
      Vasculin; Vascular protein family Vasculin-like 1

    4. XM_015140089.2 → XP_014995575.1  vasculin isoform X1

      UniProtKB/TrEMBL
      F7FZ98, G7MTS5
      Conserved Domains (1) summary
      pfam15337
      Location:398 → 477
      Vasculin; Vascular protein family Vasculin-like 1

    5. XM_015140086.2 → XP_014995572.1  vasculin isoform X1

      UniProtKB/TrEMBL
      F7FZ98, G7MTS5
      Related
      ENSMMUP00000019222.3, ENSMMUT00000020540.4
      Conserved Domains (1) summary
      pfam15337
      Location:398 → 477
      Vasculin; Vascular protein family Vasculin-like 1

    6. XM_015140090.2 → XP_014995576.1  vasculin isoform X2

      UniProtKB/TrEMBL
      F7H9N8, G7MTS5
      Related
      ENSMMUP00000034664.1, ENSMMUT00000041639.3
      Conserved Domains (1) summary
      pfam15337
      Location:377 → 456
      Vasculin; Vascular protein family Vasculin-like 1

    7. XM_028849445.1 → XP_028705278.1  vasculin isoform X2

      UniProtKB/TrEMBL
      F7H9N8, G7MTS5
      Conserved Domains (1) summary
      pfam15337
      Location:377 → 456
      Vasculin; Vascular protein family Vasculin-like 1
    Nucleotide Protein
    Heading Accession and Version

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