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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008601.1 RefSeqGene
- Range
-
5031..81080
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001318785.2 → NP_001305714.1 probable arginine--tRNA ligase, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site and lacks an alternate exon in the 5' region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus than isoform 1.
- Source sequence(s)
-
BC105784, CA314872, CB177631, DB455377
- Consensus CDS
-
CCDS93968.1
- UniProtKB/TrEMBL
- A0A8I5KQV7, H0UI22, H0UI23
- Related
- ENSP00000509195.1, ENST00000693327.1
- Conserved Domains (1) summary
-
- COG0018
Location:2 → 403
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001350505.2 → NP_001337434.1 probable arginine--tRNA ligase, mitochondrial isoform 3 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) encodes the longest isoform (3).
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93970.1
- UniProtKB/TrEMBL
- A0A8I5KP51, A0A8I5KWC6
- Related
- ENSP00000509453.1, ENST00000691725.1
- Conserved Domains (1) summary
-
- cl27258
Location:36 → 576
- tRNA-synt_1d; tRNA synthetases class I (R)
-
NM_001350506.2 → NP_001337435.1 probable arginine--tRNA ligase, mitochondrial isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) encodes isoform 4.
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93969.1
- UniProtKB/TrEMBL
- A0A8I5KPZ0, A0A8I5KQV7
- Related
- ENSP00000509147.1, ENST00000693431.1
- Conserved Domains (1) summary
-
- cl27258
Location:2 → 401
- tRNA-synt_1d; tRNA synthetases class I (R)
-
NM_001350507.2 → NP_001337436.1 probable arginine--tRNA ligase, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variants 2 and 7-10, encodes isoform 2.
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93968.1
- UniProtKB/TrEMBL
- A0A8I5KQV7, H0UI22, H0UI23
- Related
- ENSP00000509026.1, ENST00000685408.1
- Conserved Domains (1) summary
-
- COG0018
Location:2 → 403
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001350508.2 → NP_001337437.1 probable arginine--tRNA ligase, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variants 2, 6, and 8-10, encodes isoform 2.
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93968.1
- UniProtKB/TrEMBL
- A0A8I5KQV7, H0UI22, H0UI23
- Conserved Domains (1) summary
-
- COG0018
Location:2 → 403
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001350509.2 → NP_001337438.1 probable arginine--tRNA ligase, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variants 2, 6, 7, 9, and 10, encodes isoform 2.
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93968.1
- UniProtKB/TrEMBL
- A0A8I5KQV7, H0UI22, H0UI23
- Conserved Domains (1) summary
-
- COG0018
Location:2 → 403
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001350510.2 → NP_001337439.1 probable arginine--tRNA ligase, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (9), as well as variants 2, 6-8, and 10, encodes isoform 2.
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93968.1
- UniProtKB/TrEMBL
- A0A8I5KQV7, H0UI22, H0UI23
- Related
- ENSP00000510542.1, ENST00000689174.1
- Conserved Domains (1) summary
-
- COG0018
Location:2 → 403
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_001350511.2 → NP_001337440.1 probable arginine--tRNA ligase, mitochondrial isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), as well as variants 2 and 6-9, encodes isoform 2.
- Source sequence(s)
-
AL049697, AL451126
- Consensus CDS
-
CCDS93968.1
- UniProtKB/TrEMBL
- A0A8I5KQV7, H0UI22, H0UI23
- Related
- ENSP00000389656.2, ENST00000451155.2
- Conserved Domains (1) summary
-
- COG0018
Location:2 → 403
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
-
NM_020320.5 → NP_064716.2 probable arginine--tRNA ligase, mitochondrial isoform 1 precursor
See identical proteins and their annotated locations for NP_064716.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AK315669, CA314872, CB177631, DB455377
- Consensus CDS
-
CCDS5011.1
- UniProtKB/Swiss-Prot
- B2RDT7, Q5T160, Q96FU5, Q9H8K8
- UniProtKB/TrEMBL
-
A0A8I5KP51
- Related
- ENSP00000358549.5, ENST00000369536.10
- Conserved Domains (1) summary
-
- COG0018
Location:36 → 578
- ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
RNA
-
NR_134857.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate internal splice site compared to variant 1. This variant is represented as non-coding because use of the expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC022341, CA314872, CB177631
- Related
-
ENST00000686988.1
-
NR_146738.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000689206.1
-
NR_146739.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000691815.1
-
NR_146740.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000690622.1
-
NR_146741.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146742.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000690884.1
-
NR_146743.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000685701.1
-
NR_146744.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000685069.1
-
NR_146745.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146746.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000685881.1
-
NR_146747.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146748.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000685376.1
-
NR_146749.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146750.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146751.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146752.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146753.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146754.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146755.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146756.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146757.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146758.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
-
NR_146759.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL049697, AL451126
- Related
-
ENST00000688532.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
87513938..87589987 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047419092.1 → XP_047275048.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
- A0A8I5KPZ0, A0A8I5KQV7
-
XM_017011073.2 → XP_016866562.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
- A0A8I5KPZ0, A0A8I5KQV7
- Conserved Domains (1) summary
-
- cl27258
Location:2 → 401
- tRNA-synt_1d; tRNA synthetases class I (R)
-
XM_017011074.3 → XP_016866563.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
- A0A8I5KPZ0, A0A8I5KQV7
- Conserved Domains (1) summary
-
- cl27258
Location:2 → 401
- tRNA-synt_1d; tRNA synthetases class I (R)
-
XM_047419093.1 → XP_047275049.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
- A0A8I5KPZ0, A0A8I5KQV7
-
XM_047419094.1 → XP_047275050.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
- A0A8I5KPZ0, A0A8I5KQV7
-
XM_011535949.4 → XP_011534251.1 probable arginine--tRNA ligase, mitochondrial isoform X1
- Conserved Domains (3) summary
-
- cd00671
Location:126 → 388
- ArgRS_core; catalytic core domain of arginyl-tRNA synthetases
- pfam00750
Location:124 → 449
- tRNA-synt_1d; tRNA synthetases class I (R)
- cl12020
Location:425 → 472
- Anticodon_Ia_like; Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains
-
XM_047419095.1 → XP_047275051.1 probable arginine--tRNA ligase, mitochondrial isoform X3
- UniProtKB/TrEMBL
-
A0A8I5KS21
- Related
- ENSP00000509592.1, ENST00000692843.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
88722691..88798283 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054355959.1 → XP_054211934.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KQV7
-
XM_054355958.1 → XP_054211933.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KQV7
-
XM_054355960.1 → XP_054211935.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KQV7
-
XM_054355961.1 → XP_054211936.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KQV7
-
XM_054355962.1 → XP_054211937.1 probable arginine--tRNA ligase, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KQV7
-
XM_054355957.1 → XP_054211932.1 probable arginine--tRNA ligase, mitochondrial isoform X1
-
XM_054355963.1 → XP_054211938.1 probable arginine--tRNA ligase, mitochondrial isoform X3
- UniProtKB/TrEMBL
-
A0A8I5KS21
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_014107.1: Suppressed sequence
- Description
- NM_014107.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.