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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001300780.2 → NP_001287709.1 semaphorin-6A isoform 1 precursor
See identical proteins and their annotated locations for NP_001287709.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AB037789, AF279656, AI110626, AL544905, BC032619
- Consensus CDS
-
CCDS75288.1
- UniProtKB/TrEMBL
- A0A0A0MQU6, B2RCJ4
- Related
- ENSP00000257414.8, ENST00000257414.12
- Conserved Domains (2) summary
-
- cd11266
Location:48 → 513
- Sema_6A; The Sema domain, a protein interacting module, of semaphorins 6A (Sema6A)
- pfam01437
Location:514 → 544
- PSI; Plexin repeat
-
NM_020796.5 → NP_065847.1 semaphorin-6A isoform 2 precursor
See identical proteins and their annotated locations for NP_065847.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the central coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AB037789, AF279656, AI110626, AL544905, BC032619
- Consensus CDS
-
CCDS47256.1
- UniProtKB/Swiss-Prot
- Q9H2E6, Q9P2H9
- UniProtKB/TrEMBL
-
B2RCJ4
- Related
- ENSP00000345512.6, ENST00000343348.11
- Conserved Domains (2) summary
-
- cd11266
Location:48 → 513
- Sema_6A; The Sema domain, a protein interacting module, of semaphorins 6A (Sema6A)
- pfam01437
Location:514 → 544
- PSI; Plexin repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
116443555..116574823 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005272042.5 → XP_005272099.2 semaphorin-6A isoform X3
See identical proteins and their annotated locations for XP_005272099.2
- UniProtKB/TrEMBL
-
B2RCJ4
- Conserved Domains (2) summary
-
- cd11266
Location:48 → 513
- Sema_6A; The Sema domain, a protein interacting module, of semaphorins 6A (Sema6A)
- pfam01437
Location:514 → 544
- PSI; Plexin repeat
-
XM_006714663.3 → XP_006714726.1 semaphorin-6A isoform X1
- UniProtKB/TrEMBL
-
B2RCJ4
- Conserved Domains (2) summary
-
- cd11266
Location:48 → 513
- Sema_6A; The Sema domain, a protein interacting module, of semaphorins 6A (Sema6A)
- pfam01437
Location:514 → 544
- PSI; Plexin repeat
-
XM_047417451.1 → XP_047273407.1 semaphorin-6A isoform X2
- UniProtKB/Swiss-Prot
- Q9H2E6, Q9P2H9
- UniProtKB/TrEMBL
-
B2RCJ4
- Related
- ENSP00000424388.1, ENST00000510263.5
-
XM_024446138.2 → XP_024301906.1 semaphorin-6A isoform X1
- UniProtKB/TrEMBL
-
B2RCJ4
- Conserved Domains (2) summary
-
- cd11266
Location:48 → 513
- Sema_6A; The Sema domain, a protein interacting module, of semaphorins 6A (Sema6A)
- pfam01437
Location:514 → 544
- PSI; Plexin repeat
-
XM_017009675.2 → XP_016865164.1 semaphorin-6A isoform X1
- UniProtKB/TrEMBL
-
B2RCJ4
- Conserved Domains (2) summary
-
- cd11266
Location:48 → 513
- Sema_6A; The Sema domain, a protein interacting module, of semaphorins 6A (Sema6A)
- pfam01437
Location:514 → 544
- PSI; Plexin repeat
-
XM_047417452.1 → XP_047273408.1 semaphorin-6A isoform X4
- UniProtKB/TrEMBL
-
B2RCJ4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
116956014..117086961 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054353014.1 → XP_054208989.1 semaphorin-6A isoform X3
- UniProtKB/TrEMBL
-
B2RCJ4
-
XM_054353010.1 → XP_054208985.1 semaphorin-6A isoform X1
- UniProtKB/TrEMBL
-
B2RCJ4
-
XM_054353012.1 → XP_054208987.1 semaphorin-6A isoform X1
- UniProtKB/TrEMBL
-
B2RCJ4
-
XM_054353013.1 → XP_054208988.1 semaphorin-6A isoform X2
- UniProtKB/Swiss-Prot
- Q9H2E6, Q9P2H9
- UniProtKB/TrEMBL
-
B2RCJ4
-
XM_054353011.1 → XP_054208986.1 semaphorin-6A isoform X1
- UniProtKB/TrEMBL
-
B2RCJ4
-
XM_054353015.1 → XP_054208990.1 semaphorin-6A isoform X4
- UniProtKB/TrEMBL
-
B2RCJ4
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_020681.1: Suppressed sequence
- Description
- NM_020681.1: This RefSeq was permanently suppressed because it is primarily UTR sequence.