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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001256067.2 → NP_001242996.1 NADPH oxidase activator 1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The resulting protein (isoform 2) is shorter compared to isoform 1.
- Source sequence(s)
-
AB095031, BX322799
- Consensus CDS
-
CCDS94544.1
- UniProtKB/Swiss-Prot
- O60533, Q29VU9, Q29VV0, Q2TAM1, Q86UR1, Q8IUS3
- Related
- ENSP00000507846.1, ENST00000683555.1
- Conserved Domains (4) summary
-
- cd06411
Location:316 → 393
- PB1_p51; The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical ...
- cd12047
Location:403 → 455
- SH3_Noxa1_C; C-terminal Src Homology 3 domain of NADPH oxidase activator 1
- sd00006
Location:38 → 66
- TPR; TPR repeat [structural motif]
- pfam13414
Location:38 → 100
- TPR_11; TPR repeat
-
NM_001256068.2 → NP_001242997.1 NADPH oxidase activator 1 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks two alternate in-frame exons in the 3' coding region compared to variant 1. The resulting protein (isoform 3) is shorter compared to isoform 1.
- Source sequence(s)
-
AI860821, AY927791, BX322799
- Consensus CDS
-
CCDS59157.1
- UniProtKB/Swiss-Prot
-
Q86UR1
- Related
- ENSP00000376562.2, ENST00000392815.2
- Conserved Domains (4) summary
-
- cd06411
Location:260 → 337
- PB1_p51; The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical ...
- sd00006
Location:38 → 66
- TPR; TPR repeat [structural motif]
- pfam13414
Location:38 → 100
- TPR_11; TPR repeat
- cl17036
Location:347 → 406
- SH3; Src Homology 3 domain superfamily
-
NM_006647.2 → NP_006638.1 NADPH oxidase activator 1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest protein (isoform 1).
- Source sequence(s)
-
BC041594, BX322799
- Consensus CDS
-
CCDS7042.1
- UniProtKB/Swiss-Prot
-
Q86UR1
- Related
- ENSP00000342848.2, ENST00000341349.6
- Conserved Domains (4) summary
-
- cd06411
Location:316 → 393
- PB1_p51; The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical ...
- COG0457
Location:10 → 118
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:38 → 66
- TPR; TPR repeat [structural motif]
- cl17036
Location:403 → 462
- SH3; Src Homology 3 domain superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
137423393..137434406
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011518158.4 → XP_011516460.1 NADPH oxidase activator 1 isoform X1
- Conserved Domains (4) summary
-
- cd06411
Location:280 → 357
- PB1_p51; The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical ...
- sd00006
Location:38 → 66
- TPR; TPR repeat [structural motif]
- pfam13414
Location:38 → 100
- TPR_11; TPR repeat
- cl17036
Location:367 → 426
- SH3; Src Homology 3 domain superfamily
-
XM_047422658.1 → XP_047278614.1 NADPH oxidase activator 1 isoform X2
-
XM_047422660.1 → XP_047278616.1 NADPH oxidase activator 1 isoform X4
-
XM_011518159.2 → XP_011516461.1 NADPH oxidase activator 1 isoform X3
- Conserved Domains (2) summary
-
- cd06411
Location:168 → 245
- PB1_p51; The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical ...
- cl17036
Location:255 → 314
- SH3; Src Homology 3 domain superfamily
-
XM_047422659.1 → XP_047278615.1 NADPH oxidase activator 1 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
149674014..149685028
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361808.1 → XP_054217783.1 NADPH oxidase activator 1 isoform X1
-
XM_054361809.1 → XP_054217784.1 NADPH oxidase activator 1 isoform X2
-
XM_054361813.1 → XP_054217788.1 NADPH oxidase activator 1 isoform X4
-
XM_054361810.1 → XP_054217785.1 NADPH oxidase activator 1 isoform X3
-
XM_054361811.1 → XP_054217786.1 NADPH oxidase activator 1 isoform X3
-
XM_054361812.1 → XP_054217787.1 NADPH oxidase activator 1 isoform X3