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    ANKRD20A2P ankyrin repeat domain 20 family member A2, pseudogene [ Homo sapiens (human) ]

    Gene ID: 441430, updated on 10-Dec-2024

    Summary

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    Official Symbol
    ANKRD20A2Pprovided by HGNC
    Official Full Name
    ankyrin repeat domain 20 family member A2, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:31979
    See related
    Ensembl:ENSG00000290718 AllianceGenome:HGNC:31979
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANKRD20A2
    Expression
    Biased expression in testis (RPKM 5.4), thyroid (RPKM 0.9) and 12 other tissues See more
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    Genomic context

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    See ANKRD20A2P in Genome Data Viewer
    Location:
    9p11.2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (40222102..40282358)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (40237964..40297265)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724431 Neighboring gene meprin A subunit alpha pseudogene 1 Neighboring gene uncharacterized LOC105369249 Neighboring gene RNA, U6 small nuclear 1269, pseudogene Neighboring gene sorting nexin 18 pseudogene 8 Neighboring gene family with sequence similarity 95 member B1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. DNA sequence and analysis of human chromosome 9. Humphray SJ, et al. Nature, 2004 May 27. PMID 15164053, Free PMC Article
    2. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Huttlin EL, et al. Cell, 2021 May 27. PMID 33961781, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Other Names

    • ankyrin repeat domain 20 family, member A2
    • ankyrin repeat domain-containing protein 20A2

    Clone Names

    • MGC176486

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      40222102..40282358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004837502.2 RNA Sequence

    2. XR_007061496.1 RNA Sequence

    3. XR_004837499.2 RNA Sequence

    4. XR_004837500.2 RNA Sequence

    5. XR_004837501.2 RNA Sequence

      Related
      ENST00000673925.2

    6. XR_004837503.2 RNA Sequence

      Related
      ENST00000809082.1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      40237964..40297265
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_008488120.1 RNA Sequence

    2. XR_008488121.1 RNA Sequence

    3. XR_008488122.1 RNA Sequence

    4. XR_008488123.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001012421.1: Suppressed sequence

      Description
      NM_001012421.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5SQ80.1 GenPept UniProtKB/Swiss-Prot:Q5SQ80

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