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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001433972.1 → NP_001420901.1 spectrin beta chain, erythrocytic isoform 2
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000006
- UniProtKB/TrEMBL
- A0A8I6AWM3, A0A8I6G9M6
-
NM_212522.1 → NP_997687.1 spectrin beta chain, erythrocytic isoform 1
See identical proteins and their annotated locations for NP_997687.1
Status: VALIDATED
- Source sequence(s)
-
AY238343
- UniProtKB/TrEMBL
- A0A140UHX6, F1MAL3, Q6XDA0
- Related
- ENSRNOP00000009028.9, ENSRNOT00000009028.9
- Conserved Domains (5) summary
-
- smart00150
Location:2013 → 2086
- SPEC; Spectrin repeats
- smart00033
Location:177 → 273
- CH; Calponin homology domain
- cd00014
Location:55 → 158
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:530 → 742
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00435
Location:422 → 526
- Spectrin; Spectrin repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086024.1 Reference GRCr8
- Range
-
101043512..101170389 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006240244.5 → XP_006240306.1 spectrin beta chain, erythrocytic isoform X1
- Related
- ENSRNOP00000097655.1, ENSRNOT00000094264.2
- Conserved Domains (6) summary
-
- smart00150
Location:2013 → 2086
- SPEC; Spectrin repeats
- cd00176
Location:530 → 742
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd10571
Location:2182 → 2287
- PH_beta_spectrin; Beta-spectrin pleckstrin homology (PH) domain
- pfam00435
Location:422 → 526
- Spectrin; Spectrin repeat
- cd21246
Location:40 → 156
- CH_SPTB-like_rpt1; first calponin homology (CH) domain found in the beta-I spectrin-like subfamily
- cd21319
Location:170 → 281
- CH_SPTB_rpt2; second calponin homology (CH) domain found in spectrin beta chain, erythrocytic (SPTB) and similar proteins
-
XM_017594143.3 → XP_017449632.1 spectrin beta chain, erythrocytic isoform X1
- UniProtKB/TrEMBL
- A0A8I6AWM3, A0A8I6G9M6
- Conserved Domains (6) summary
-
- smart00150
Location:2013 → 2086
- SPEC; Spectrin repeats
- cd00176
Location:530 → 742
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd10571
Location:2182 → 2287
- PH_beta_spectrin; Beta-spectrin pleckstrin homology (PH) domain
- pfam00435
Location:422 → 526
- Spectrin; Spectrin repeat
- cd21246
Location:40 → 156
- CH_SPTB-like_rpt1; first calponin homology (CH) domain found in the beta-I spectrin-like subfamily
- cd21319
Location:170 → 281
- CH_SPTB_rpt2; second calponin homology (CH) domain found in spectrin beta chain, erythrocytic (SPTB) and similar proteins
-
XM_017594142.3 → XP_017449631.1 spectrin beta chain, erythrocytic isoform X1
- UniProtKB/TrEMBL
- A0A8I6AWM3, A0A8I6G9M6
- Conserved Domains (6) summary
-
- smart00150
Location:2013 → 2086
- SPEC; Spectrin repeats
- cd00176
Location:530 → 742
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd10571
Location:2182 → 2287
- PH_beta_spectrin; Beta-spectrin pleckstrin homology (PH) domain
- pfam00435
Location:422 → 526
- Spectrin; Spectrin repeat
- cd21246
Location:40 → 156
- CH_SPTB-like_rpt1; first calponin homology (CH) domain found in the beta-I spectrin-like subfamily
- cd21319
Location:170 → 281
- CH_SPTB_rpt2; second calponin homology (CH) domain found in spectrin beta chain, erythrocytic (SPTB) and similar proteins