U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Garem2 GRB2 associated regulator of MAPK1 subtype 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362801, updated on 9-Dec-2024

    Summary

    Official Symbol
    Garem2provided by RGD
    Official Full Name
    GRB2 associated regulator of MAPK1 subtype 2provided by RGD
    Primary source
    RGD:1597138
    See related
    EnsemblRapid:ENSRNOG00000048004 AllianceGenome:RGD:1597138
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Fam59b; Gareml
    Summary
    Orthologous to human GAREM2 (GRB2 associated regulator of MAPK1 subtype 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 14.3), Heart (RPKM 9.1) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Garem2 in Genome Data Viewer
    Location:
    6q14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (31949877..31961591, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (26228965..26255576, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (27631364..27643076, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha Neighboring gene RB binding protein 4, chromatin remodeling factor, pseudogene 4 Neighboring gene RAB10, member RAS oncogene family

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    GRB2-associated and regulator of MAPK protein 2
    Names
    GRB2 associated regulator of MAPK1, member 2
    GRB2 associated, regulator of MAPK1-like
    GRB2-associated and regulator of MAPK protein-like
    family with sequence similarity 59, member B
    protein FAM59B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191874.1NP_001178803.1  GRB2-associated and regulator of MAPK protein 2

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      M0RB26
      Related
      ENSRNOP00000066748.1, ENSRNOT00000074348.3
      Conserved Domains (2) summary
      cd09525
      Location:811877
      SAM_GAREM; SAM domain of GAREM subfamily
      pfam12736
      Location:29338
      CABIT; Cell-cycle sustaining, positive selection,

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      31949877..31961591 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)