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    Fam110d family with sequence similarity 110, member D [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500563, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam110dprovided by RGD
    Official Full Name
    family with sequence similarity 110, member Dprovided by RGD
    Primary source
    RGD:1564994
    See related
    EnsemblRapid:ENSRNOG00000016491 AllianceGenome:RGD:1564994
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Grrp1; RGD1564994
    Summary
    Orthologous to human FAM110D (family with sequence similarity 110 member D). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 53.5), Heart (RPKM 40.8) and 8 other tissues See more
    Orthologs
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    Genomic context

    See Fam110d in Genome Data Viewer
    Location:
    5q36
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (151754773..151757743, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (146471048..146474019, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (152470898..152473903, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene similar to human chromosome 1 open reading frame 230 Neighboring gene zinc finger protein 593 Neighboring gene PDLIM1 interacting kinase 1 like Neighboring gene tripartite motif containing 63

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    protein FAM110D
    Names
    glycine/arginine-rich protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109270.1NP_001102740.1  protein FAM110D

      See identical proteins and their annotated locations for NP_001102740.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473968
      UniProtKB/TrEMBL
      A6IT14, D3ZKX3
      Related
      ENSRNOP00000102258.1, ENSRNOT00000168270.1
      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      151754773..151757743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006239122.5XP_006239184.1  protein FAM110D isoform X1

      See identical proteins and their annotated locations for XP_006239184.1

      UniProtKB/TrEMBL
      A6IT14, D3ZKX3
      Related
      ENSRNOP00000102739.1, ENSRNOT00000145136.1
      Conserved Domains (2) summary
      pfam14160
      Location:141262
      FAM110_C; Centrosome-associated C-terminus
      pfam14161
      Location:1341
      FAM110_N; Centrosome-associated N-terminus