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    rsrc2 arginine/serine-rich coiled-coil 2 [ Danio rerio (zebrafish) ]

    Gene ID: 406566, updated on 9-Dec-2024

    Summary

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    Official Symbol
    rsrc2provided by ZNC
    Official Full Name
    arginine/serine-rich coiled-coil 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2457
    See related
    Ensembl:ENSDARG00000042534 AllianceGenome:ZFIN:ZDB-GENE-040426-2457
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:85695; tdsubc_1d5; wu:fc56g08; ik:tdsubc_1d5; xx:tdsubc_1d5; si:ch211-110p13.2
    Summary
    Orthologous to human RSRC2 (arginine and serine rich coiled-coil 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See rsrc2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (67276271..67292677, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (66597526..66614313, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene si:ch211-110p13.9 Neighboring gene zinc finger, CCHC domain containing 8 Neighboring gene uncharacterized LOC101885639 Neighboring gene MLX interacting protein Neighboring gene uracil DNA glycosylase a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Hematopoietic gene expression profile in zebrafish kidney marrow. Song HD, et al. Proc Natl Acad Sci U S A, 2004 Nov 16. PMID 15520368, Free PMC Article
    2. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    arginine/serine-rich coiled-coil protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213280.1 → NP_998445.1  arginine/serine-rich coiled-coil protein 2

      See identical proteins and their annotated locations for NP_998445.1

      Status: PROVISIONAL

      Source sequence(s)
      BC067581
      UniProtKB/Swiss-Prot
      Q6NWI1
      Related
      ENSDARP00000062365.5, ENSDART00000062366.7
      Conserved Domains (1) summary
      pfam15477
      Location:324 → 394
      SMAP; Small acidic protein family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      67276271..67292677 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005165621.5 → XP_005165678.1  arginine/serine-rich coiled-coil protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8M2BD43
      Conserved Domains (1) summary
      pfam15477
      Location:328 → 398
      SMAP; Small acidic protein family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NWI1.1 GenPept UniProtKB/Swiss-Prot:Q6NWI1

    Gene LinkOut

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