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    fbxo28 F-box protein 28 [ Danio rerio (zebrafish) ]

    Gene ID: 556288, updated on 4-Jan-2025

    Summary

    Official Symbol
    fbxo28provided by ZNC
    Official Full Name
    F-box protein 28provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-4665
    See related
    Ensembl:ENSDARG00000027159 AllianceGenome:ZFIN:ZDB-GENE-030131-4665
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fd49h06; wu:fd49h06; si:ch211-178h7.5
    Summary
    Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 100. Orthologous to human FBXO28 (F-box protein 28). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See fbxo28 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (482806..491915)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (352515..361624)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene EGF containing fibulin extracellular matrix protein 1 Neighboring gene HEAT repeat containing 5B Neighboring gene delta(4)-desaturase, sphingolipid 1 Neighboring gene nuclear VCP like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001327835.1NP_001314764.1  F-box only protein 28

      Status: VALIDATED

      Source sequence(s)
      BX005147, CU570800
      UniProtKB/TrEMBL
      A0A8M1P937
      Related
      ENSDARP00000119405.1, ENSDART00000134884.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      482806..491915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)