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    znf865 zinc finger protein 865 [ Danio rerio (zebrafish) ]

    Gene ID: 100034513, updated on 9-Dec-2024

    Summary

    Official Symbol
    znf865provided by ZNC
    Official Full Name
    zinc finger protein 865provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-896
    See related
    Ensembl:ENSDARG00000036698 AllianceGenome:ZFIN:ZDB-GENE-060503-896
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-109n11.2
    Summary
    Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in telencephalon. Orthologous to human ZNF865 (zinc finger protein 865). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See znf865 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (10201165..10214239, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (10282240..10295572, complement)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a Neighboring gene uncharacterized LOC137488476 Neighboring gene D site albumin promoter binding protein a Neighboring gene shisa family member 7 Neighboring gene CCR4-NOT transcription complex, subunit 3b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    zinc finger protein 865
    Names
    novel zinc finger protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083075.1NP_001076544.1  zinc finger protein 865

      See identical proteins and their annotated locations for NP_001076544.1

      Status: PROVISIONAL

      Source sequence(s)
      CR628325
      UniProtKB/TrEMBL
      A0A8M2B6A3, Q1L8T8
      Related
      ENSDARP00000125728.1, ENSDART00000151629.3
      Conserved Domains (2) summary
      sd00017
      Location:943963
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:956978
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      10201165..10214239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005159402.4XP_005159459.1  zinc finger protein 865 isoform X1

      See identical proteins and their annotated locations for XP_005159459.1

      UniProtKB/TrEMBL
      A0A8M2B6A3, Q1L8T8
      Related
      ENSDARP00000053299.6, ENSDART00000053300.8
      Conserved Domains (2) summary
      sd00017
      Location:943963
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:956978
      zf-H2C2_2; Zinc-finger double domain
    2. XM_005159403.5XP_005159460.1  zinc finger protein 865 isoform X1

      See identical proteins and their annotated locations for XP_005159460.1

      UniProtKB/TrEMBL
      A0A8M2B6A3, Q1L8T8
      Conserved Domains (2) summary
      sd00017
      Location:943963
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:956978
      zf-H2C2_2; Zinc-finger double domain