U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    OTP81 Tetratricopeptide repeat (TPR)-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817526, updated on 18-Sep-2024

    Summary

    Official Symbol
    OTP81
    Official Full Name
    Tetratricopeptide repeat (TPR)-like superfamily protein
    Primary source
    TAIR:AT2G29760
    Locus tag
    AT2G29760
    See related
    Araport:AT2G29760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ORGANELLE TRANSCRIPT PROCESSING 81; T27A16.14; T27A16_14
    Summary
    Encodes a chloroplast RNA editing factor.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See OTP81 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (12712879..12715852)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 71C2 Neighboring gene UDP-glucosyl transferase 71C1 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene maternally expressed family protein

    General gene information

    NM_128530.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding PubMed 
    enables zinc ion binding  
    Component Evidence Code Pubs
    located_in chloroplast PubMed 
    located_in chloroplast  

    General protein information

    Preferred Names
    Tetratricopeptide repeat (TPR)-like superfamily protein
    NP_180537.1
    • ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G08070.1); Has 39055 Blast hits to 14294 proteins in 286 species: Archae - 1; Bacteria - 14; Metazoa - 160; Fungi - 158; Plants - 37962; Viruses - 2; Other Eukaryotes - 758 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12712879..12715852
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128530.3 → NP_180537.1  Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180537.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82380
      UniProtKB/TrEMBL
      A0A178VWZ6, A0A5S9X2I9
      Conserved Domains (3) summary
      PLN03077
      Location:43 → 736
      PLN03077; Protein ECB2; Provisional
      sd00006
      Location:533 → 563
      TPR; TPR repeat [structural motif]
      sd00004
      Location:433 → 460
      PPR; PPR repeat [structural motif]
    External link. Please review our privacy policy.