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    Ycf1 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815412, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ycf1 protein
    Primary source
    TAIR:AT2G07739
    Locus tag
    AT2G07739
    See related
    Araport:AT2G07739
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5E7.2; T5E7_2
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (3495511..3496398, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene miscRNA Neighboring gene tRNA-Cys Neighboring gene tRNA-Asn Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene tRNA-Tyr

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_126767.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ycf1 protein
    NP_178809.1
    • Ycf1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATMG00370.1); Has 1145 Blast hits to 1145 proteins in 726 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      3495511..3496398 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126767.2 → NP_178809.1  Ycf1 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178809.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93296, Q27GL5, Q8S8J2
      UniProtKB/TrEMBL
      A0A5S9YIA0, A0A654GF54
      Conserved Domains (1) summary
      pfam05758
      Location:22 → 176
      Ycf1; Ycf1
    Nucleotide Protein
    Heading Accession and Version

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