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    MDP40 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838914, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MDP40
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G23060
    Locus tag
    AT1G23060
    See related
    Araport:AT1G23060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MICROTUBULE DESTABILIZING PROTEIN 40; T26J12.16; T26J12_16
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    Genomic context

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    See MDP40 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (8170693..8173085, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene ncRNA Neighboring gene organic solute transporter ostalpha protein (DUF300) Neighboring gene Auxin efflux carrier family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis microtubule destabilizing protein40 is involved in brassinosteroid regulation of hypocotyl elongation. Wang X, et al. Plant Cell, 2012 Oct. PMID 23115248, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MDP40 is a key regulator in BR regulation of cortical microtubule reorientation and mediates hypocotyl growth. [microtubule destabilizing protein40] [MDP40]
      Title: Arabidopsis microtubule destabilizing protein40 is involved in brassinosteroid regulation of hypocotyl elongation.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001332582.1
    NM_001332583.1
    NM_001332584.1
    NM_102154.2
    NM_202162.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_564188.1
    • BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species: Archae - 0; Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).
    NP_973891.1
    • BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8170693..8173085 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102154.2 → NP_564188.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564188.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Z1, A0A384LAT5, A0A5S9VP85, Q93ZG1

    2. NM_001332583.1 → NP_001320400.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Z1, A0A384LAT5, A0A5S9VP85, Q93ZG1

    3. NM_001332582.1 → NP_001320401.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VP85, O49310

    4. NM_001332584.1 → NP_001320399.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VP85, O49310

    5. NM_202162.2 → NP_973891.1  uncharacterized protein AT1G23060 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973891.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VP85, O49310
    Nucleotide Protein
    Heading Accession and Version

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