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    cyclin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843399, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cyclin-like protein
    Primary source
    TAIR:AT1G70620
    Locus tag
    AT1G70620
    See related
    Araport:AT1G70620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5A18.20; F5A18_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (26626528..26631104)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L18e/L15 superfamily protein Neighboring gene transporter associated with antigen processing protein 1 Neighboring gene Nucleotide-diphospho-sugar transferase family protein Neighboring gene octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334469.1
    NM_105730.3
    NM_179542.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cyclin-like protein
    NP_001185363.1
    • cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages.
    NP_177219.2
    • cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 112611 Blast hits to 60905 proteins in 2332 species: Archae - 119; Bacteria - 12075; Metazoa - 52298; Fungi - 16219; Plants - 10822; Viruses - 1423; Other Eukaryotes - 19655 (source: NCBI BLink).
    NP_849873.1
    • cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 95268 Blast hits to 52287 proteins in 2120 species: Archae - 101; Bacteria - 11250; Metazoa - 43040; Fungi - 13274; Plants - 9970; Viruses - 1254; Other Eukaryotes - 16379 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26626528..26631104
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334464.1 → NP_001320367.1  cyclin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIT3, A0A1P8AMN8

    2. NM_001334465.1 → NP_001320366.1  cyclin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIT3, A0A1P8AMN8

    3. NM_001334466.1 → NP_001320363.1  cyclin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKI2, A0A1P8AMK7

    4. NM_001198434.1 → NP_001185363.1  cyclin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185363.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WT50, F4I6U7
      Conserved Domains (1) summary
      pfam03153
      Location:77 → 265
      TFIIA; Transcription factor IIA, alpha/beta subunit

    5. NM_001334468.1 → NP_001320368.1  cyclin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKI2, A0A1P8AML1

    6. NM_001334467.1 → NP_001320365.1  cyclin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJL9, A0A1P8AMN9

    7. NM_105730.3 → NP_177219.2  cyclin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177219.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WH35, F4I6U8
      Conserved Domains (2) summary
      pfam03153
      Location:77 → 265
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam15996
      Location:414 → 530
      PNISR; Arginine/serine-rich protein PNISR

    8. NM_179542.2 → NP_849873.1  cyclin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849873.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WH35, Q9CAB4
      Conserved Domains (2) summary
      PRK10263
      Location:89 → 253
      PRK10263; DNA translocase FtsK; Provisional
      pfam15996
      Location:427 → 504
      PNISR; Arginine/serine-rich protein PNISR

    9. NM_001334469.1 → NP_001320364.1  cyclin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WH35, A0A1P8AMK4
    Nucleotide Protein
    Heading Accession and Version

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