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    Acetamidase/Formamidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829911, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Acetamidase/Formamidase family protein
    Primary source
    TAIR:AT4G37560
    Locus tag
    AT4G37560
    See related
    Araport:AT4G37560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19F18.50; F19F18_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (17646408..17648684)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene LOB domain-containing protein 39 Neighboring gene Acetamidase/Formamidase family protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342447.1
    NM_119920.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    Acetamidase/Formamidase family protein
    NP_568029.1
    • Acetamidase/Formamidase family protein; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: Acetamidase/Formamidase family protein (TAIR:AT4G37550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17646408..17648684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119920.3 → NP_568029.1  Acetamidase/Formamidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568029.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8H1G4, Q94CA8
      Conserved Domains (1) summary
      pfam03069
      Location:72 → 402
      FmdA_AmdA; Acetamidase/Formamidase family

    2. NM_001342447.1 → NP_001327986.1  Acetamidase/Formamidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V261, A0A1P8B392
      Conserved Domains (1) summary
      pfam03069
      Location:67 → 401
      FmdA_AmdA; Acetamidase/Formamidase family
    Nucleotide Protein
    Heading Accession and Version

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