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    mucin-5AC-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824317, updated on 18-Sep-2024

    Summary

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    Official Full Name
    mucin-5AC-like protein
    Primary source
    TAIR:AT3G51540
    Locus tag
    AT3G51540
    See related
    Araport:AT3G51540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (19115184..19117461)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene diacylglycerol acyltransferase family Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene Malectin/receptor-like protein kinase family protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Basic Proline-Rich Protein-Mediated Microtubules Are Essential for Lobe Growth and Flattened Cell Geometry. Wong JH, et al. Plant Physiol, 2019 Dec. PMID 31601644, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cortical microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mucin-5AC-like protein
    NP_190722.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G08670.1); Has 22744 Blast hits to 9965 proteins in 783 species: Archae - 64; Bacteria - 2760; Metazoa - 8515; Fungi - 3864; Plants - 499; Viruses - 702; Other Eukaryotes - 6340 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19115184..19117461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115013.2 → NP_190722.1  mucin-5AC-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190722.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8C8, A0A5S9XJV3, Q9SCZ5
      Conserved Domains (1) summary
      PHA03247
      Location:107 → 310
      PHA03247; large tegument protein UL36; Provisional

    2. NM_001339520.1 → NP_001326153.1  mucin-5AC-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8C8, A0A1I9LNE5, A0A5S9XJV3

    3. NM_001339521.1 → NP_001326152.1  mucin-5AC-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8C8, A0A1I9LNE4, A0A5S9XJV3

    4. NM_001339522.1 → NP_001326154.1  mucin-5AC-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LNE6
    Nucleotide Protein
    Heading Accession and Version

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