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    C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825302, updated on 18-Sep-2024

    Summary

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    Official Full Name
    C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
    Primary source
    TAIR:AT3G61300
    Locus tag
    AT3G61300
    See related
    Araport:AT3G61300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (22687570..22690619)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene O-glucosyltransferase rumi-like protein (DUF821) Neighboring gene O-glucosyltransferase rumi-like protein (DUF821) Neighboring gene AT hook motif DNA-binding family protein Neighboring gene Bestrophin-like protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of Multiple C2 Domain and Transmembrane Region Proteins in Arabidopsis. Liu L, et al. Plant Physiol, 2018 Mar. PMID 29259105, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_115994.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vesicle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
    NP_191689.1
    • C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 6422 Blast hits to 4830 proteins in 287 species: Archae - 0; Bacteria - 0; Metazoa - 3763; Fungi - 508; Plants - 1619; Viruses - 8; Other Eukaryotes - 524 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22687570..22690619
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115994.4 → NP_191689.1  C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191689.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M2D4
      UniProtKB/TrEMBL
      A0A654FJR6
      Conserved Domains (5) summary
      cd04019
      Location:405 → 549
      C2C_MCTP_PRT_plant; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cd08378
      Location:250 → 370
      C2B_MCTP_PRT_plant; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cd08379
      Location:564 → 688
      C2D_MCTP_PRT_plant; C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      pfam08372
      Location:816 → 972
      PRT_C; Plant phosphoribosyltransferase C-terminal
      cl14603
      Location:6 → 135
      C2; C2 domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M2D4.1

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