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    Enhancer of polycomb-like transcription factor protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830344, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Enhancer of polycomb-like transcription factor protein
    Primary source
    TAIR:AT5G04670
    Locus tag
    AT5G04670
    See related
    Araport:AT5G04670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1E3.30; T1E3_30
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (1335873..1341534, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 99 Neighboring gene pseudo Neighboring gene cytochrome P450, family 77, subfamily A, polypeptide 4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001342783.1
    NM_120549.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Enhancer of polycomb-like transcription factor protein
    NP_196087.1
    • Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT4G32620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1335873..1341534 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120549.3 → NP_196087.1  Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196087.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UIA3, A0A5S9Y1F2, A0A654FYD5, Q9LZ30
      Conserved Domains (1) summary
      pfam10513
      Location:510 → 599
      EPL1; Enhancer of polycomb-like

    2. NM_001342783.1 → NP_001330507.1  Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UIA3, A0A5S9Y1F2, A0A654FYD5, Q9LZ30
      Conserved Domains (1) summary
      pfam10513
      Location:510 → 599
      EPL1; Enhancer of polycomb-like
    Nucleotide Protein
    Heading Accession and Version

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