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    alpha-taxilin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835156, updated on 18-Sep-2024

    Summary

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    Official Full Name
    alpha-taxilin-like protein
    Primary source
    TAIR:AT5G50840
    Locus tag
    AT5G50840
    See related
    Araport:AT5G50840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K7B16.6; K7B16_6
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (20685772..20688942)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 97 Neighboring gene nuclear polyadenylated RNA-binding protein Neighboring gene Transketolase family protein Neighboring gene Protein kinase superfamily protein Neighboring gene ubiquitin-conjugating enzyme 27

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_124462.4
    NM_203192.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha-taxilin-like protein
    NP_199897.2
    • CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974921.1
    • CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20685772..20688942
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124462.4 → NP_199897.2  alpha-taxilin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199897.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UDE0, Q8RXD7
      Conserved Domains (1) summary
      pfam09728
      Location:94 → 390
      Taxilin; Myosin-like coiled-coil protein

    2. NM_203192.2 → NP_974921.1  alpha-taxilin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974921.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UC87, F4KAG0
      Conserved Domains (1) summary
      pfam09728
      Location:94 → 391
      Taxilin; Myosin-like coiled-coil protein
    Nucleotide Protein
    Heading Accession and Version

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