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    Dohh deoxyhypusine hydroxylase/monooxygenase [ Mus musculus (house mouse) ]

    Gene ID: 102115, updated on 9-Dec-2024

    Summary

    Official Symbol
    Dohhprovided by MGI
    Official Full Name
    deoxyhypusine hydroxylase/monooxygenaseprovided by MGI
    Primary source
    MGI:MGI:1915964
    See related
    Ensembl:ENSMUSG00000078440 AllianceGenome:MGI:1915964
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hlrc1; 1110033C18Rik
    Summary
    Enables deoxyhypusine monooxygenase activity. Involved in peptidyl-lysine modification to peptidyl-hypusine. Predicted to be active in cytosol. Is expressed in nervous system; retina; and skeletal muscle. Orthologous to human DOHH (deoxyhypusine hydroxylase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in ovary adult (RPKM 72.2), adrenal adult (RPKM 53.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Dohh in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81220268..81224186)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81384434..81388352)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene tektin bundle interacting protein 1 Neighboring gene fizzy and cell division cycle 20 related 1 Neighboring gene STARR-seq mESC enhancer starr_27331 Neighboring gene STARR-seq mESC enhancer starr_27332 Neighboring gene predicted gene, 48551 Neighboring gene microRNA 6913 Neighboring gene predicted gene, 48552 Neighboring gene small integral membrane protein 24

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables deoxyhypusine monooxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables deoxyhypusine monooxygenase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables deoxyhypusine monooxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables deoxyhypusine monooxygenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables iron ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables iron ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in cytosol ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    deoxyhypusine hydroxylase
    Names
    HEAT-like (PBS lyase) repeat containing 1
    deoxyhypusine dioxygenase
    deoxyhypusine monooxygenase
    NP_598725.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133964.3NP_598725.2  deoxyhypusine hydroxylase

      See identical proteins and their annotated locations for NP_598725.2

      Status: VALIDATED

      Source sequence(s)
      AC155937
      Consensus CDS
      CCDS35997.1
      UniProtKB/Swiss-Prot
      Q8BNT3, Q8BTD5, Q99LN9
      Related
      ENSMUSP00000072534.7, ENSMUST00000072751.13
      Conserved Domains (2) summary
      COG1413
      Location:37292
      HEAT; HEAT repeat [General function prediction only]
      sd00044
      Location:3967
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      81220268..81224186
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)