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    Mrpl17 mitochondrial ribosomal protein L17 [ Mus musculus (house mouse) ]

    Gene ID: 27397, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mrpl17provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L17provided by MGI
    Primary source
    MGI:MGI:1351608
    See related
    Ensembl:ENSMUSG00000030879 AllianceGenome:MGI:1351608
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rpml26; MRP-L26
    Summary
    Predicted to enable protein domain specific binding activity. Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Located in mitochondrial inner membrane. Is expressed in several structures, including early conceptus; gonad; skeleton; submandibular gland primordium; and thymus primordium. Orthologous to human MRPL17 (mitochondrial ribosomal protein L17). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in ovary adult (RPKM 9.3), subcutaneous fat pad adult (RPKM 8.6) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Mrpl17 in Genome Data Viewer
    Location:
    7 E3; 7 55.98 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (105452989..105460294, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (105803782..105811087, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr7:112900636-112900937 Neighboring gene tripeptidyl peptidase I Neighboring gene dachsous cadherin related 1 Neighboring gene predicted gene, 57787 Neighboring gene STARR-positive B cell enhancer ABC_E1092 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:112959820-112959929 Neighboring gene GTPase, very large interferon inducible, pseudogene 1 Neighboring gene predicted gene 15645

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein domain specific binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial genome maintenance TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in mitochondrial translation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within translation ISA
    Inferred from Sequence Alignment
    more info
    PubMed 

    General protein information

    Preferred Names
    large ribosomal subunit protein bL17m
    Names
    39S ribosomal protein L17, mitochondrial
    L17mt
    MRP-L17
    ribosomal protein, mitochondrial, L26

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025301.2NP_079577.1  large ribosomal subunit protein bL17m precursor

      See identical proteins and their annotated locations for NP_079577.1

      Status: VALIDATED

      Source sequence(s)
      AC121823, AK007828, AK147957, BY098205
      Consensus CDS
      CCDS21662.1
      UniProtKB/Swiss-Prot
      Q91VR0, Q9D8P4
      Related
      ENSMUSP00000117971.2, ENSMUST00000124482.3
      Conserved Domains (1) summary
      pfam01196
      Location:28126
      Ribosomal_L17; Ribosomal protein L17

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      105452989..105460294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)