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    Aqp3 aquaporin 3 [ Mus musculus (house mouse) ]

    Gene ID: 11828, updated on 27-Nov-2024

    Summary

    Official Symbol
    Aqp3provided by MGI
    Official Full Name
    aquaporin 3provided by MGI
    Primary source
    MGI:MGI:1333777
    See related
    Ensembl:ENSMUSG00000028435 AllianceGenome:MGI:1333777
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AQP-2
    Summary
    Predicted to enable channel activity; identical protein binding activity; and urea transmembrane transporter activity. Involved in glycerol transmembrane transport and water transport. Acts upstream of or within several processes, including renal water absorption; response to ischemia; and urea transport. Located in basolateral plasma membrane and cell-cell junction. Is expressed in several structures, including alimentary system; capillary; early conceptus; genitourinary system; and sensory organ. Used to study nephrogenic diabetes insipidus. Orthologous to human AQP3 (aquaporin 3 (Gill blood group)). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in bladder adult (RPKM 172.0), stomach adult (RPKM 137.4) and 6 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Aqp3 in Genome Data Viewer
    Location:
    4 A5; 4 20.94 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (41092724..41098183, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (41092724..41098183, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene aquaporin 7 Neighboring gene predicted gene, 25637 Neighboring gene STARR-seq mESC enhancer starr_10018 Neighboring gene STARR-positive B cell enhancer ABC_E150 Neighboring gene STARR-positive B cell enhancer ABC_E6162 Neighboring gene nucleolar protein family 6 (RNA-associated) Neighboring gene ubiquitin-conjugating enzyme E2R 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables glycerol channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables glycerol channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables glycerol channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables polyol transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables polyol transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables urea transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables water channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables water channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables water channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables water channel activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    acts_upstream_of_or_within establishment of localization in cell IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in glycerol transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glycerol transmembrane transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in glycerol transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in odontogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in polyol transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of immune system process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within renal water absorption IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within renal water absorption IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within response to ischemia IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to retinoic acid IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to retinoic acid ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within urea transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in water transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in water transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within water transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in water transport ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within water transport TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in basolateral plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in basolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in basolateral plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell-cell junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell-cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    aquaporin-3
    Names
    AQP-3
    aquaglyceroporin-3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_016689.2NP_057898.2  aquaporin-3

      See identical proteins and their annotated locations for NP_057898.2

      Status: VALIDATED

      Source sequence(s)
      AK145678
      Consensus CDS
      CCDS38714.1
      UniProtKB/Swiss-Prot
      Q3TU75, Q8R2N1, Q9JJN8, Q9WTJ3
      Related
      ENSMUSP00000055110.8, ENSMUST00000055327.8
      Conserved Domains (1) summary
      cd00333
      Location:23264
      MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      41092724..41098183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)