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    Gm1553 predicted gene 1553 [ Mus musculus (house mouse) ]

    Gene ID: 432480, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm1553provided by MGI
    Official Full Name
    predicted gene 1553provided by MGI
    Primary source
    MGI:MGI:2686399
    See related
    Ensembl:ENSMUSG00000094186 AllianceGenome:MGI:2686399
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lcrn
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Gm1553 in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (82322367..82328452, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (82486533..82492618, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr10:81816788-81817089 Neighboring gene predicted gene 4924 Neighboring gene STARR-seq mESC enhancer starr_27361 Neighboring gene mitogen-activated protein kinase kinase kinase 7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_27362 Neighboring gene STARR-seq mESC enhancer starr_27363 Neighboring gene STARR-seq mESC enhancer starr_27364 Neighboring gene required for meiotic nuclear division 5 homolog A pseudogene Neighboring gene adaptor-related protein complex 3, mu 1 subunit, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001255990.1 → NP_001242919.1  lacrein precursor

      See identical proteins and their annotated locations for NP_001242919.1

      Status: PROVISIONAL

      Source sequence(s)
      AY702028, CK616737
      Consensus CDS
      CCDS56738.1
      UniProtKB/TrEMBL
      Q66VB7
      Related
      ENSMUSP00000135907.2, ENSMUST00000177934.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      82322367..82328452 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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