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    4833411C07Rik RIKEN cDNA 4833411C07 gene [ Mus musculus (house mouse) ]

    Gene ID: 71624, updated on 22-Oct-2024

    Summary

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    Official Symbol
    4833411C07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4833411C07 geneprovided by MGI
    Primary source
    MGI:MGI:1918874
    See related
    Ensembl:ENSMUSG00000109089 AllianceGenome:MGI:1918874
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in liver E18 (RPKM 21.0), liver adult (RPKM 4.6) and 4 other tissues See more
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    Genomic context

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    See 4833411C07Rik in Genome Data Viewer
    Location:
    8 A1.1; 8 5.28 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (10949922..10952334)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (10899922..10902334)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32540 Neighboring gene RIKEN cDNA B930025P03 gene Neighboring gene STARR-positive B cell enhancer ABC_E3767 Neighboring gene predicted gene 2814 Neighboring gene RIKEN cDNA 3930402G23 gene Neighboring gene predicted gene, 32594

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A MAFG-lncRNA axis links systemic nutrient abundance to hepatic glucose metabolism. Pradas-Juni M, et al. Nat Commun, 2020 Jan 31. PMID 32005828, Free PMC Article
    2. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
    3. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_102285.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK050245, BY714173
      Related
      ENSMUST00000245988.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      10949922..10952334
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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