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    4921525O09Rik RIKEN cDNA 4921525O09 gene [ Mus musculus (house mouse) ]

    Gene ID: 74050, updated on 6-Oct-2024

    Summary

    Official Symbol
    4921525O09Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4921525O09 geneprovided by MGI
    Primary source
    MGI:MGI:1921300
    See related
    Ensembl:ENSMUSG00000113211 AllianceGenome:MGI:1921300
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 16.4) and thymus adult (RPKM 3.1) See more
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    Genomic context

    See 4921525O09Rik in Genome Data Viewer
    Location:
    13 A5; 13 26.72 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (52250771..52278194)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (52096741..52124160)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34531 Neighboring gene STARR-seq mESC enhancer starr_34532 Neighboring gene predicted gene, 26651 Neighboring gene STARR-seq mESC enhancer starr_34533 Neighboring gene STARR-positive B cell enhancer ABC_E9878 Neighboring gene predicted gene, 40948 Neighboring gene STARR-seq mESC enhancer starr_34534 Neighboring gene STARR-seq mESC enhancer starr_34536 Neighboring gene predicted gene, 48199 Neighboring gene predicted gene, 33041

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045061.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT010575
      Related
      ENSMUST00000220691.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      52250771..52278194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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