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    4933436I01Rik RIKEN cDNA 4933436I01 gene [ Mus musculus (house mouse) ]

    Gene ID: 66780, updated on 27-Nov-2024

    Summary

    Official Symbol
    4933436I01Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933436I01 geneprovided by MGI
    Primary source
    MGI:MGI:1914030
    See related
    Ensembl:ENSMUSG00000025288 AllianceGenome:MGI:1914030
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 2.7) See more
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    Genomic context

    See 4933436I01Rik in Genome Data Viewer
    Location:
    X A7.1; X 34.81 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (66963470..66965056, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (67919864..67921450, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14692 Neighboring gene ribosomal protein L7A, pseudogene 13 Neighboring gene STARR-seq mESC enhancer starr_47295 Neighboring gene microRNA 201 Neighboring gene microRNA 547

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    General protein information

    Preferred Names
    uncharacterized protein LOC66780

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025763.1NP_080039.1  uncharacterized protein LOC66780

      See identical proteins and their annotated locations for NP_080039.1

      Status: PREDICTED

      Source sequence(s)
      AK017084
      Consensus CDS
      CCDS30170.1
      UniProtKB/TrEMBL
      F8SGY1, F8SGY2, Q9D3T1
      Related
      ENSMUSP00000026325.2, ENSMUST00000026325.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      66963470..66965056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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