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    sle1 protein sle1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542484, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sle1
    Official Full Name
    protein sle1
    Primary source
    PomBase:SPAC1A6.07
    Locus tag
    SPOM_SPAC1A6.07
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    seg1
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    Genomic context

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    See sle1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1084092..1086426)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene triacylglycerol lipase Neighboring gene ncRNA Neighboring gene protein meu31 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein mug125 Neighboring gene sphingosine N-acyltransferase Lag1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Seg1 controls eisosome assembly and shape. Moreira KE, et al. J Cell Biol, 2012 Aug 6. PMID 22869600, Free PMC Article
    2. Comprehensive proteomics analysis reveals new substrates and regulators of the fission yeast clp1/cdc14 phosphatase. Chen JS, et al. Mol Cell Proteomics, 2013 May. PMID 23297348, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in plasma membrane organization IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cell cortex of cell tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of eisosome filament IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein sle1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1084092..1086426
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018595.3 → NP_593199.1  protein sle1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593199.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13858, Q9UU73
      Conserved Domains (2) summary
      pfam03157
      Location:354 → 450
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam08580
      Location:49 → 239
      KAR9; Yeast cortical protein KAR9
    Nucleotide Protein
    Heading Accession and Version

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