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    uts1 urotensin 1 [ Danio rerio (zebrafish) ]

    Gene ID: 563732, updated on 9-Dec-2024

    Summary

    Official Symbol
    uts1provided by ZNC
    Official Full Name
    urotensin 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041014-348
    See related
    Ensembl:ENSDARG00000014927 AllianceGenome:ZFIN:ZDB-GENE-041014-348
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ucn; UCN1; wu:fq17a01; si:ch211-243j20.4
    Summary
    Predicted to enable hormone activity. Predicted to be located in extracellular region. Is expressed in several structures, including basal plate midbrain region; heart; nervous system; pectoral fin; and testis. Orthologous to human UCN (urocortin). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See uts1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (38724575..38727396)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (38821597..38824517)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene si:ch211-243j20.2 Neighboring gene mitochondrial inner membrane protein MPV17 Neighboring gene tripartite motif containing 54 Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    General gene information

    Clone Names

    • MGC153826

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables hormone activity  
    Component Evidence Code Pubs
    located_in extracellular region  

    General protein information

    Preferred Names
    urotensin 1
    Names
    UI
    urocortin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030180.1 → NP_001025351.1  urotensin 1 precursor

      Status: PROVISIONAL

      Source sequence(s)
      BX510372
      UniProtKB/TrEMBL
      A0A8M1N7B1, Q5TZ50
      Related
      ENSDARP00000019621.7, ENSDART00000015095.8
      Conserved Domains (1) summary
      smart00039
      Location:97 → 136
      CRF; corticotropin-releasing factor

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      38724575..38727396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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